RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 MELTFP08582 738 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 HYAL1Q12794 435 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 C1orf189Q5VU69 101 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 LPCAT3Q6P1A2 487 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 FAM219AQ8IW50 185 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 C9orf40Q8IXQ3 194 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 CCDC36Q8IYA8 594 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 ZNF101Q8IZC7 436 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 OR13C9Q8NGT0 318 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 ZNF721Q8TF20 911 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 PTGES2Q9H7Z7 377 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 BARX1Q9HBU1 254 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 HPF1Q9NWY4 346 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 NPIPA1Q9UND3 350 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 ZNF208O43345 1280 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 CD74P04233 296 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 PGAM2P15259 253 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 ZBTB25P24278 435 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 CFPP27918 469 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 ARL4DP49703 201 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 EBPQ15125 230 aaKnown RBP13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 DMRTC1Q5HYR2 192 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 COX15Q7KZN9 410 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 DCUN1D4Q92564 292 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 EMC6Q9BV81 110 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 TMEM200CA6NKL6 621 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 RAB27BO00194 218 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 DRD1P21728 446 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 ABCD3P28288 659 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 MRPS21P82921 87 aaKnown RBP13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 POU3F1Q03052 451 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 TOMM20Q15388 145 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 SLC25A42Q86VD7 318 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 GTPBP8Q8N3Z3 284 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 MRPL38Q96DV4 380 aaKnown RBP13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 C5orf34Q96MH7 638 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 DNTTIP1Q9H147 329 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 VSX1Q9NZR4 365 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 COPS7AQ9UBW8 275 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 CD207Q9UJ71 328 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 THADAQ6YHU6 1953 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 A0A0B4J2A0 478 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 RAB3AP20336 220 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 KIAA0895LQ68EN5 471 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 ZNF704Q6ZNC4 412 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 MARCH1Q8TCQ1 289 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 FOXRED1Q96CU9 486 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 NUDT22Q9BRQ3 303 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 EDEM2Q9BV94 578 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 G6PC2Q9NQR9 355 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 SHPKQ9UHJ6 478 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 VDAC3Q9Y277 283 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 WIPF3A6NGB9 483 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 ALG1L2C9J202 215 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 DXOO77932 396 aaKnown RBP13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 FSTP19883 344 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 SLC26A5P58743 744 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 ZNF345Q14585 488 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 TMEM244Q5VVB8 128 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 SLC29A4Q7RTT9 530 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 ARL5BQ96KC2 179 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 CHMP1AQ9HD42 196 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 PRR13Q9NZ81 148 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 RAB22AQ9UL26 194 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 CSAG2Q9Y5P2 127 aa13.55□□□□□ -0.24
SEMA3B-203ENST00000419007 IGKV1D-43A0A0B4J1Z2 117 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 SULT2B1O00204 365 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 SYT7O43581 403 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 IGKV3-11P04433 115 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 PI3P19957 117 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 SERPINF1P36955 418 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 INPP5JQ15735 1006 aaPredicted RBP13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 DEFB133Q30KQ1 61 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 ZNF260Q3ZCT1 412 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 AWAT2Q6E213 333 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 FOXQ1Q9C009 403 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 PIGMQ9H3S5 423 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 TMEM231Q9H6L2 316 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 MKL2Q9ULH7 1088 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 IGHV3-20A0A0C4DH32 117 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 TTLL8A6PVC2 850 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 H3BML4 177 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 OPN1LWP04000 364 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 SLC25A4P12235 298 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 UNC119Q13432 240 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 GFOD2Q3B7J2 385 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 NUP54Q7Z3B4 507 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 SLC26A10Q8NG04 563 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 OR10H5Q8NGA6 315 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 MITD1Q8WV92 249 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 MRGPRFQ96AM1 343 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 LDLRAD4O15165 306 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 ELAVL1Q15717 326 aaKnown RBP13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 GUCA2BQ16661 112 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 HAGHLQ6PII5 290 aaPredicted RBP13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 KLHL24Q6TFL4 600 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 Q6ZS52 159 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 TMPPEQ6ZT21 453 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 GRINAQ7Z429 371 aa13.54□□□□□ -0.24
SEMA3B-203ENST00000419007 OR4K17Q8NGC6 315 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms