RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 EIF4E2O60573 245 aaKnown RBP10.6□□□□□ -0.71
LIMK1-202ENST00000418310 STK17BO94768 372 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 PMS2P2O95744 297 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 SLC9A3R2Q15599 337 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 PRAMEF20Q5VT98 475 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 SLC38A9Q8NBW4 561 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 MARCH1Q8TCQ1 289 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 FBXW5Q969U6 566 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 ZNF775Q96BV0 537 aaPredicted RBP10.6□□□□□ -0.71
LIMK1-202ENST00000418310 ZNF285Q96NJ3 590 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 CCNL2Q96S94 520 aaPredicted RBP10.6□□□□□ -0.71
LIMK1-202ENST00000418310 GPER1Q99527 375 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 UTP23Q9BRU9 249 aaKnown RBP10.6□□□□□ -0.71
LIMK1-202ENST00000418310 TMPRSS13Q9BYE2 586 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 RFPL4AA6NLU0 287 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 RFPL4AL1F8VTS6 287 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 B3GALNT1O75752 331 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 TIAF1O95411 115 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 ERCC1P07992 297 aaPredicted RBP10.6□□□□□ -0.71
LIMK1-202ENST00000418310 GIMD1P0DJR0 217 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 HSD11B1P28845 292 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 NPY4RP50391 375 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 TAGLNQ01995 201 aaKnown RBP10.6□□□□□ -0.71
LIMK1-202ENST00000418310 UNC119Q13432 240 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 FAM166AQ6J272 317 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 TMEM104Q8NE00 496 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 BVESQ8NE79 360 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 TMEM185AQ8NFB2 350 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 OR5M9Q8NGP3 310 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 ADAT1Q9BUB4 502 aaKnown RBP10.6□□□□□ -0.71
LIMK1-202ENST00000418310 ELL3Q9HB65 397 aaPredicted RBP10.6□□□□□ -0.71
LIMK1-202ENST00000418310 FSCN3Q9NQT6 498 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 TRBV11-1A0A0K0K1C0 115 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 METTL21EPA6NDL7 271 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 PCP4L1A6NKN8 68 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 HMSDA8MTL9 139 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 G3V3Y1 287 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 GDF9O60383 454 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 FADS1O60427 444 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 NPIPB7O75200 414 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 TSPAN9O75954 239 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 ZNF735P0CB33 412 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 BDKRB2P30411 391 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 HNRNPKP61978 463 aaKnown RBP eCLIP10.6□□□□□ -0.71
LIMK1-202ENST00000418310 SLC51BQ86UW2 128 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 PXT1Q8NFP0 134 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 ST7LQ8TDW4 575 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 SLC2A4RGQ9NR83 387 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 ASF1BQ9NVP2 202 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 MBD2Q9UBB5 411 aa10.6□□□□□ -0.71
LIMK1-202ENST00000418310 MYO7BQ6PIF6 2116 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 TMEM131Q92545 1883 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 OR2AT4A6NND4 320 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 DISC1C4P0D8 188 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 SDCBPO00560 298 aaPredicted RBP10.59□□□□□ -0.71
LIMK1-202ENST00000418310 RAMP1O60894 148 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 TTRP02766 147 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 HCKP08631 526 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 BCKDHBP21953 392 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 CD27P26842 260 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 MPGP29372 298 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 PNLIPRP2P54317 469 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 ROM1Q03395 351 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 TMEM229BQ8NBD8 167 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 ASB10Q8WXI3 467 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 MARVELD3Q96A59 401 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 OR5B2Q96R09 309 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 ASH2LQ9UBL3 628 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 MUC3AQ02505 3323 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 A0A1B0GX78 115 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 D6RAR5 112 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 RAB27BO00194 218 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 RER1O15258 196 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 OR2T1O43869 369 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 VSIG8P0DPA2 414 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 ZNF20P17024 532 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 EMP2P54851 167 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 DNM1P46Q6ZS02 220 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 H1FNTQ75WM6 255 aaPredicted RBP10.59□□□□□ -0.71
LIMK1-202ENST00000418310 PBOV1Q9GZY1 135 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 TMEM231Q9H6L2 316 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 OR2S2Q9NQN1 319 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 LMO7DNF2Z398 122 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 DUX1O43812 170 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 IGFBP3P17936 291 aaPredicted RBP10.59□□□□□ -0.71
LIMK1-202ENST00000418310 MECP2P51608 486 aaKnown RBP10.59□□□□□ -0.71
LIMK1-202ENST00000418310 PAQR4Q8N4S7 273 aaPredicted RBP10.59□□□□□ -0.71
LIMK1-202ENST00000418310 BHLHE23Q8NDY6 225 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 OR5M8Q8NGP6 311 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 GPR27Q9NS67 375 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 SLC22A11Q9NSA0 550 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 KLHL13Q9P2N7 655 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 KCNK7Q9Y2U2 307 aa10.59□□□□□ -0.71
LIMK1-202ENST00000418310 COL6A3P12111 3177 aa10.58□□□□□ -0.72
LIMK1-202ENST00000418310 A0A0B4J2A0 478 aa10.58□□□□□ -0.72
LIMK1-202ENST00000418310 A0A1W2PR77 199 aa10.58□□□□□ -0.72
LIMK1-202ENST00000418310 C5orf63A6NC05 138 aa10.58□□□□□ -0.72
LIMK1-202ENST00000418310 H3BUI4 141 aa10.58□□□□□ -0.72
LIMK1-202ENST00000418310 SOCS1O15524 211 aa10.58□□□□□ -0.72
LIMK1-202ENST00000418310 ZNF217O75362 1048 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms