RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 IGHV2OR16-5A0A0B4J2B6 119 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 TMEM269A0A1B0GVZ9 245 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 A6NNC1 897 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 SULT1C4O75897 302 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 ATE1O95260 518 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 IGHA1P01876 353 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 DBHP09172 617 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 SLC2A1P11166 492 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 IGFBP2P18065 325 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 CRHBPP24387 322 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 GCH1P30793 250 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 OPRL1P41146 370 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 PSMA6P60900 246 aaKnown RBP7.34□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF85Q03923 595 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 SPOCK1Q08629 439 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 MRPL28Q13084 256 aaKnown RBP7.34□□□□□ -1.23
TRIM48-201ENST00000417545 MED22Q15528 200 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 RGS7BPQ6MZT1 257 aaPredicted RBP7.34□□□□□ -1.23
TRIM48-201ENST00000417545 SEZ6L2Q6UXD5 910 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF704Q6ZNC4 412 aaPredicted RBP7.34□□□□□ -1.23
TRIM48-201ENST00000417545 C22orf34Q6ZV56 151 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 FAM57BQ71RH2 274 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 RHOUQ7L0Q8 258 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 MRPL21Q7Z2W9 205 aaKnown RBP7.34□□□□□ -1.23
TRIM48-201ENST00000417545 MYPOPQ86VE0 399 aaPredicted RBP7.34□□□□□ -1.23
TRIM48-201ENST00000417545 RFLNBQ8N5W9 214 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 CPEB3Q8NE35 698 aaKnown RBP7.34□□□□□ -1.23
TRIM48-201ENST00000417545 KBTBD8Q8NFY9 601 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 OR1J1Q8NGS3 322 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 HAVCR2Q8TDQ0 301 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 ZDHHC16Q969W1 377 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 APOBEC3DQ96AK3 386 aaPredicted RBP7.34□□□□□ -1.23
TRIM48-201ENST00000417545 POM121L2Q96KW2 1035 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 AMELYQ99218 206 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 BCL2L14Q9BZR8 327 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 OR10A2Q9H208 303 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 MOB1AQ9H8S9 216 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 DDX28Q9NUL7 540 aaKnown RBP7.34□□□□□ -1.23
TRIM48-201ENST00000417545 MRPS18AQ9NVS2 196 aaKnown RBP7.34□□□□□ -1.23
TRIM48-201ENST00000417545 UBAP1Q9NZ09 502 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 PTTG3PQ9NZH4 202 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 ERVK-18Q9QC07 812 aa7.34□□□□□ -1.23
TRIM48-201ENST00000417545 CAB39Q9Y376 341 aaPredicted RBP7.34□□□□□ -1.23
TRIM48-201ENST00000417545 HEATR1Q9H583 2144 aaKnown RBP7.33□□□□□ -1.24
TRIM48-201ENST00000417545 LOC100509620A0A075B734 347 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 DPRXA6NFQ7 191 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 MAGEB4O15481 346 aaPredicted RBP7.33□□□□□ -1.24
TRIM48-201ENST00000417545 XRCC2O43543 280 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 MT-ND2P03891 347 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 ACSM4P0C7M7 580 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 COL8A1P27658 744 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 PSMB10P40306 273 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 ETV1P50549 477 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 FABP6P51161 128 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF121P58317 390 aaPredicted RBP7.33□□□□□ -1.24
TRIM48-201ENST00000417545 PPP1CBP62140 327 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 SLC35A2P78381 396 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 ROM1Q03395 351 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 CDONQ4KMG0 1287 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 SPATA46Q5T0L3 261 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF787Q6DD87 383 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 SSX6Q7RTT6 188 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 PRSS48Q7RTY5 328 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF584Q8IVC4 421 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 C1orf174Q8IYL3 243 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 SYS1Q8N2H4 156 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 OR52H1Q8NGJ2 320 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 OR10S1Q8NGN2 331 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 SPRYD4Q8WW59 207 aaPredicted RBP7.33□□□□□ -1.24
TRIM48-201ENST00000417545 AKAP1Q92667 903 aaKnown RBP eCLIP7.33□□□□□ -1.24
TRIM48-201ENST00000417545 COMMD4Q9H0A8 199 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 UBTD1Q9HAC8 227 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 PNRC2Q9NPJ4 139 aaKnown RBP7.33□□□□□ -1.24
TRIM48-201ENST00000417545 TRIM36Q9NQ86 728 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 ACOXLQ9NUZ1 547 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 FAIMQ9NVQ4 179 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 MRM2Q9UI43 246 aaKnown RBP7.33□□□□□ -1.24
TRIM48-201ENST00000417545 PCDHGB5Q9Y5G0 923 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 R4GMQ9 66 aa7.33□□□□□ -1.24
TRIM48-201ENST00000417545 UBR5O95071 2799 aaPredicted RBP7.32□□□□□ -1.24
TRIM48-201ENST00000417545 A0A1W2PPW3 197 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 J3QW42 95 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 MRPS14O60783 128 aaKnown RBP7.32□□□□□ -1.24
TRIM48-201ENST00000417545 SMPD2O60906 423 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 HSMCR30P0CW71 290 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 CFL1P23528 166 aaKnown RBP7.32□□□□□ -1.24
TRIM48-201ENST00000417545 PCSK6P29122 969 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 C21orf33P30042 268 aaPredicted RBP7.32□□□□□ -1.24
TRIM48-201ENST00000417545 CALCRP30988 508 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 DCTDP32321 178 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 UCP2P55851 309 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 WNT4P56705 351 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 OR12D2P58182 307 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 TAS2R43P59537 309 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 TLE4Q04727 773 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 DAZAP2Q15038 168 aaPredicted RBP7.32□□□□□ -1.24
TRIM48-201ENST00000417545 ODF4Q2M2E3 257 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF718Q3SXZ3 478 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 KCTD21Q4G0X4 260 aa7.32□□□□□ -1.24
TRIM48-201ENST00000417545 OR2G6Q5TZ20 316 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms