RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DAG1Q14118 895 aa15.3■□□□□ 0.04
VCP-202ENST00000417448 KCNMB1Q16558 191 aa15.3■□□□□ 0.04
VCP-202ENST00000417448 CCDC92Q53HC0 331 aaPredicted RBP15.3■□□□□ 0.04
VCP-202ENST00000417448 BCDIN3DQ7Z5W3 292 aaKnown RBP15.3■□□□□ 0.04
VCP-202ENST00000417448 CPOQ8IVL8 374 aa15.3■□□□□ 0.04
VCP-202ENST00000417448 CBR4Q8N4T8 237 aa15.3■□□□□ 0.04
VCP-202ENST00000417448 SLC29A1Q99808 456 aa15.3■□□□□ 0.04
VCP-202ENST00000417448 SLC6A7Q99884 636 aa15.3■□□□□ 0.04
VCP-202ENST00000417448 WDR76Q9H967 626 aa15.3■□□□□ 0.04
VCP-202ENST00000417448 CDH20Q9HBT6 801 aa15.3■□□□□ 0.04
VCP-202ENST00000417448 SLC25A19Q9HC21 320 aa15.3■□□□□ 0.04
VCP-202ENST00000417448 HINT3Q9NQE9 182 aaKnown RBP15.3■□□□□ 0.04
VCP-202ENST00000417448 C5orf49A4QMS7 147 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 EI24O14681 340 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 ZNF3P17036 446 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 NR4A1P22736 598 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 APLNRP35414 380 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 PCBD1P61457 104 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 SNAPC1Q16533 368 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 FAHD2BQ6P2I3 314 aaPredicted RBP15.29■□□□□ 0.04
VCP-202ENST00000417448 DPPA2Q7Z7J5 298 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 LRP11Q86VZ4 500 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 PQLC1Q8N2U9 271 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 OR6K6Q8NGW6 343 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 OR2T4Q8NH00 348 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 STMN2Q93045 179 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 FAHD2AQ96GK7 314 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 POM121L2Q96KW2 1035 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 TPK1Q9H3S4 243 aa15.29■□□□□ 0.04
VCP-202ENST00000417448 SGCEO43556 437 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 PRKYO43930 277 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 DOK2O60496 412 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 PNPP00491 289 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 HMGN1P05114 100 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 ERCC1P07992 297 aaPredicted RBP15.28■□□□□ 0.04
VCP-202ENST00000417448 DBHP09172 617 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 HKR1P10072 659 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 PAX7P23759 505 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 GGT2P36268 569 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 WNT5AP41221 380 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 SLC25A1P53007 311 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 LSM6P62312 80 aaKnown RBP15.28■□□□□ 0.04
VCP-202ENST00000417448 ESRRGP62508 458 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 UBA52P62987 128 aaKnown RBP15.28■□□□□ 0.04
VCP-202ENST00000417448 GALK2Q01415 458 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 GLO1Q04760 184 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 TBC1D28Q2M2D7 210 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 KLHL12Q53G59 568 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 CFAP77Q6ZQR2 320 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 VASH1Q7L8A9 365 aaPredicted RBP15.28■□□□□ 0.04
VCP-202ENST00000417448 C10orf67Q8IYJ2 551 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 PARP8Q8N3A8 854 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 NUP37Q8NFH4 326 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 IL17RDQ8NFM7 739 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 OR4F15Q8NGB8 312 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 DNAJC9Q8WXX5 260 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 PLEKHA8Q96JA3 519 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 ZNF442Q9H7R0 627 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 MOV10Q9HCE1 1003 aaKnown RBP15.28■□□□□ 0.04
VCP-202ENST00000417448 TREM2Q9NZC2 230 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 ZNF281Q9Y2X9 895 aa15.28■□□□□ 0.04
VCP-202ENST00000417448 ZAR1LA6NP61 321 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 PRR23D1E9PI22 279 aaPredicted RBP15.27■□□□□ 0.04
VCP-202ENST00000417448 NGFP01138 241 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 ADRA2AP08913 450 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 PRR23D2P0DMB1 279 aaPredicted RBP15.27■□□□□ 0.04
VCP-202ENST00000417448 HTR5AP47898 357 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 GDI2P50395 445 aaKnown RBP15.27■□□□□ 0.04
VCP-202ENST00000417448 FOXL1Q12952 345 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 AQP6Q13520 282 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 RCN1Q15293 331 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 ELFN2Q5R3F8 820 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 SPATA46Q5T0L3 261 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 LINC01590Q5TEZ4 76 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 SLX4IPQ5VYV7 408 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 SLC18B1Q6NT16 456 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 ZNF101Q8IZC7 436 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 TCEANCQ8N8B7 351 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 OR51F2Q8NH61 342 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 IL4I1Q96RQ9 567 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 RBM4BQ9BQ04 359 aaKnown RBP15.27■□□□□ 0.04
VCP-202ENST00000417448 SYT3Q9BQG1 590 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 CDADC1Q9BWV3 514 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 SUCNR1Q9BXA5 334 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 G6PC2Q9NQR9 355 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 PLEK2Q9NYT0 353 aa15.27■□□□□ 0.04
VCP-202ENST00000417448 FBXO9Q9UK97 447 aaPredicted RBP15.27■□□□□ 0.04
VCP-202ENST00000417448 WNK1Q9H4A3 2382 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 SYNGR3O43761 229 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 CLPTM1O96005 669 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 ALPLP05186 524 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 LCKP06239 509 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 SPARCP09486 303 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 ZNF823P16415 610 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 FMO3P31513 532 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 SCRN3Q0VDG4 424 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 SPATC1Q76KD6 591 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 SYT9Q86SS6 491 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 ALDH16A1Q8IZ83 802 aa15.26■□□□□ 0.03
VCP-202ENST00000417448 OR1J2Q8NGS2 313 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms