RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 GNB2P62879 340 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 MEP1BQ16820 701 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 ZNF181Q2M3W8 571 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 FAM201AQ5SY85 155 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 LEG1Q6P5S2 330 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 CORO6Q6QEF8 472 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 BTNL3Q6UXE8 466 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 DPY19L2P2Q6ZN68 376 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 COLCA1Q6ZS62 124 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 MOGAT3Q86VF5 341 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 BHLHE23Q8NDY6 225 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 GJC3Q8NFK1 279 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 NEIL1Q96FI4 390 aaPredicted RBP12.39□□□□□ -0.43
RPS28-201ENST00000417088 RSRC1Q96IZ7 334 aaKnown RBP12.39□□□□□ -0.43
RPS28-201ENST00000417088 COQ7Q99807 217 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 HOPXQ9BPY8 73 aaPredicted RBP12.39□□□□□ -0.43
RPS28-201ENST00000417088 HDHD2Q9H0R4 259 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 WDR76Q9H967 626 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 ARGLU1Q9NWB6 273 aaPredicted RBP12.39□□□□□ -0.43
RPS28-201ENST00000417088 NDUFAF4Q9P032 175 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 POLR1DQ9Y2S0 133 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 LHFPL6Q9Y693 200 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 DOCK11Q5JSL3 2073 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 IGLV1-36A0A0B4J1U3 117 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 TRBV4-1A0A0J9YWV2 114 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 A0A1B0GWJ7 208 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 POM121CA8CG34 1229 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 FSTL3O95633 263 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 CRABP1P29762 137 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 CENPAP49450 140 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 RPS6KA3P51812 740 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 IL13RA1P78552 427 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 SEC23BQ15437 767 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 ZNF404Q494X3 552 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 FGD3Q5JSP0 725 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 PGM2L1Q6PCE3 622 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.38□□□□□ -0.43
RPS28-201ENST00000417088 FAM162AQ96A26 154 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 PLEKHA8Q96JA3 519 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 TMEM100Q9NV29 134 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 RPS6KA6Q9UK32 745 aa12.38□□□□□ -0.43
RPS28-201ENST00000417088 FAM32AQ9Y421 112 aaKnown RBP12.38□□□□□ -0.43
RPS28-201ENST00000417088 TRAV40A0A0B4J280 105 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 KIR2DS1A0A191URI9 304 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 UNC119BA6NIH7 251 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 LRRC30A6NM36 301 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 HLA-DPB1P04440 258 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 SELEP16581 610 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 RHCEP18577 417 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 PRSS12P56730 875 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 DBPQ10586 325 aaPredicted RBP12.37□□□□□ -0.43
RPS28-201ENST00000417088 COX10Q12887 443 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 KRTAP27-1Q3LI81 207 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 DNM1P34Q6PK57 102 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 LYPD2Q6UXB3 125 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 C1orf87Q8N0U7 546 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 OR6V1Q8N148 313 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 OR8B3Q8NGG8 313 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 C7orf34Q96L11 122 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 OR8B2Q96RD0 313 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 KCTD14Q9BQ13 255 aaPredicted RBP12.37□□□□□ -0.43
RPS28-201ENST00000417088 FUZQ9BT04 418 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 EFCAB1Q9HAE3 211 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 SRA1Q9HD15 236 aaKnown RBP12.37□□□□□ -0.43
RPS28-201ENST00000417088 B9D1Q9UPM9 204 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 AURKCQ9UQB9 309 aa12.37□□□□□ -0.43
RPS28-201ENST00000417088 MDFIC2A0A1B0GVS7 189 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 DIRAS1O95057 198 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 PPP1R3DO95685 299 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 ACSM4P0C7M7 580 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 FPR3P25089 353 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 MDH1P40925 334 aaKnown RBP12.36□□□□□ -0.43
RPS28-201ENST00000417088 GATA4P43694 442 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 PITPNBP48739 271 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 MAB21L1Q13394 359 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 C16orf87Q6PH81 154 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 SMARCD3Q6STE5 483 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 HACD2Q6Y1H2 254 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 LINC00346Q8IVM7 164 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 SLC26A10Q8NG04 563 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 DHRS1Q96LJ7 313 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 ERMAPQ96PL5 475 aaPredicted RBP12.36□□□□□ -0.43
RPS28-201ENST00000417088 NUDT16L1Q9BRJ7 211 aaKnown RBP12.36□□□□□ -0.43
RPS28-201ENST00000417088 HCAR1Q9BXC0 346 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 SLITRK2Q9H156 845 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 PRDM13Q9H4Q3 707 aa12.36□□□□□ -0.43
RPS28-201ENST00000417088 NDUFAB1O14561 156 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 MDKP21741 143 aaPredicted RBP12.35□□□□□ -0.43
RPS28-201ENST00000417088 GK2Q14410 553 aaPredicted RBP12.35□□□□□ -0.43
RPS28-201ENST00000417088 DEFB112Q30KQ8 113 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 WDR25Q64LD2 544 aaPredicted RBP12.35□□□□□ -0.43
RPS28-201ENST00000417088 SLC18B1Q6NT16 456 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 TREML4Q6UXN2 200 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 BRD3OSQ6XYD6 125 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 ZNF841Q6ZN19 808 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 CFAP77Q6ZQR2 320 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 NLRC3Q7RTR2 1065 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 NAA40Q86UY6 237 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 FITM2Q8N6M3 262 aa12.35□□□□□ -0.43
RPS28-201ENST00000417088 FAM86B1Q8N7N1 296 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms