RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 DEFB108BQ8NET1 73 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 OR8G5Q8NG78 346 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 OR52E2Q8NGJ4 325 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 GNPDA2Q8TDQ7 276 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 ZNF582Q96NG8 517 aaPredicted RBP13.07□□□□□ -0.32
ACTB-202ENST00000414620 PITX2Q99697 317 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 SUCNR1Q9BXA5 334 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 EGLN3Q9H6Z9 239 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 GCM1Q9NP62 436 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 ESM1Q9NQ30 184 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 CD300AQ9UGN4 299 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 TAGLN3Q9UI15 199 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 TMCC3Q9ULS5 477 aa13.07□□□□□ -0.32
ACTB-202ENST00000414620 ANK2Q01484 3957 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 OR6C68A6NDL8 312 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 CEACAM18A8MTB9 384 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 F5H0A9 414 aaPredicted RBP13.06□□□□□ -0.32
ACTB-202ENST00000414620 F5H5P2 479 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 J3QW42 95 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 ARPC3O15145 178 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 FSHBP01225 129 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 HLA-DPB1P04440 258 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 PYCR1P32322 319 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 RPS27P42677 84 aaKnown RBP13.06□□□□□ -0.32
ACTB-202ENST00000414620 GSSP48637 474 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 GNGT1P63211 74 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.06□□□□□ -0.32
ACTB-202ENST00000414620 FAM201AQ5SY85 155 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 PGBD2Q6P3X8 592 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 USP43Q70EL4 1123 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 NAA40Q86UY6 237 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 MOGAT3Q86VF5 341 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 ZDHHC21Q8IVQ6 265 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 DEFB107AQ8IZN7 70 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 OR9Q2Q8NGE9 314 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 OR2AJ1Q8NGZ0 328 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 OR13G1Q8NGZ3 307 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 JMJD8Q96S16 334 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 RBM4Q9BWF3 364 aaKnown RBP13.06□□□□□ -0.32
ACTB-202ENST00000414620 CDADC1Q9BWV3 514 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 PPIAL4AQ9Y536 164 aa13.06□□□□□ -0.32
ACTB-202ENST00000414620 IQCF6A8MYZ5 107 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 ACSM4P0C7M7 580 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 ZNF12P17014 697 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 IFNGR2P38484 337 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 MDH2P40926 338 aaKnown RBP13.05□□□□□ -0.32
ACTB-202ENST00000414620 SLC6A9P48067 706 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 SRP9P49458 86 aaKnown RBP13.05□□□□□ -0.32
ACTB-202ENST00000414620 ZNF154Q13106 437 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 RSPO1Q2MKA7 263 aaPredicted RBP13.05□□□□□ -0.32
ACTB-202ENST00000414620 ESCO2Q56NI9 601 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 CYP2R1Q6VVX0 501 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 ZBTB46Q86UZ6 589 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 ZDHHC22Q8N966 263 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 CYB561A3Q8NBI2 242 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 FAM216AQ8WUB2 273 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 GCDHQ92947 438 aaPredicted RBP13.05□□□□□ -0.32
ACTB-202ENST00000414620 ATF6BQ99941 703 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 SLC30A2Q9BRI3 323 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 IL1RAPQ9NPH3 570 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 PNRC2Q9NPJ4 139 aaKnown RBP13.05□□□□□ -0.32
ACTB-202ENST00000414620 MRPL22Q9NWU5 206 aaKnown RBP13.05□□□□□ -0.32
ACTB-202ENST00000414620 INSIG2Q9Y5U4 225 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 AUP1Q9Y679 476 aa13.05□□□□□ -0.32
ACTB-202ENST00000414620 PPIAL4EA0A075B759 164 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 PPIAL4CA0A0B4J2A2 164 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 TVP23AA6NH52 213 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 A8MXK9 166 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 PPIAL4DF5H284 164 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 ATP8B1O43520 1251 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 LCATP04180 440 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 PPIAL4FP0DN26 164 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 RPS2P15880 293 aaKnown RBP13.04□□□□□ -0.32
ACTB-202ENST00000414620 ATP6V1B2P21281 511 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 GGT2P36268 569 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 TRAP1Q12931 704 aaKnown RBP13.04□□□□□ -0.32
ACTB-202ENST00000414620 PPP1R8Q12972 351 aaKnown RBP13.04□□□□□ -0.32
ACTB-202ENST00000414620 TSPAN31Q12999 210 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 KRTAP27-1Q3LI81 207 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 SLC36A3Q495N2 470 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 SLC27A4Q6P1M0 643 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 LYPD4Q6UWN0 246 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 C16orf89Q6UX73 402 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 MUC20Q8N307 709 aaPredicted RBP13.04□□□□□ -0.32
ACTB-202ENST00000414620 SIGLECL1Q8N7X8 197 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 OR52L1Q8NGH7 329 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 OR51L1Q8NGJ5 315 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 POP5Q969H6 163 aaKnown RBP13.04□□□□□ -0.32
ACTB-202ENST00000414620 DUX5Q96PT3 197 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 BTBD10Q9BSF8 475 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 MRI1Q9BV20 369 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 HCAR1Q9BXC0 346 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 C1QTNF5Q9BXJ0 243 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 PLA2G12AQ9BZM1 189 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 ZNF69Q9UC07 566 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 OR5V1Q9UGF6 321 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 ARL2BPQ9Y2Y0 163 aa13.04□□□□□ -0.32
ACTB-202ENST00000414620 IGHV3OR16-10A0A075B7F0 116 aa13.03□□□□□ -0.32
ACTB-202ENST00000414620 TMEM89A2RUT3 159 aa13.03□□□□□ -0.32
ACTB-202ENST00000414620 PSKH1P11801 424 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms