RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 SLAMF6Q96DU3 332 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 ZNF799Q96GE5 643 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 MAP6Q96JE9 813 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 KCNJ15Q99712 375 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 MED20Q9H944 212 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 F8P00451 2351 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 AKAP9Q99996 3911 aa12.58□□□□□ -0.4
CHD1-202ENST00000414220 HEXAP06865 529 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 ACSM4P0C7M7 580 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 MPV17P39210 176 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 RPS27P42677 84 aaKnown RBP12.57□□□□□ -0.4
CHD1-202ENST00000414220 TMEM33P57088 247 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 LOXL1Q08397 574 aaPredicted RBP12.57□□□□□ -0.4
CHD1-202ENST00000414220 PSG7Q13046 419 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 PCK2Q16822 640 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 LINC01590Q5TEZ4 76 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 DPY19L4Q7Z388 723 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 ZMYND19Q96E35 227 aaPredicted RBP12.57□□□□□ -0.4
CHD1-202ENST00000414220 ZNF582Q96NG8 517 aaPredicted RBP12.57□□□□□ -0.4
CHD1-202ENST00000414220 PKP2Q99959 881 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 C1QTNF5Q9BXJ0 243 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 CHODLQ9H9P2 273 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 SAP30LQ9HAJ7 183 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 DDX28Q9NUL7 540 aaKnown RBP12.57□□□□□ -0.4
CHD1-202ENST00000414220 PTTG3PQ9NZH4 202 aa12.57□□□□□ -0.4
CHD1-202ENST00000414220 PURGQ9UJV8 347 aaKnown RBP12.57□□□□□ -0.4
CHD1-202ENST00000414220 ZAR1LA6NP61 321 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 SPRY3O43610 288 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 TLX2O43763 284 aaPredicted RBP12.56□□□□□ -0.4
CHD1-202ENST00000414220 MITFO75030 526 aaPredicted RBP12.56□□□□□ -0.4
CHD1-202ENST00000414220 LYNP07948 512 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 KITLGP21583 273 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 NR4A2P43354 598 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 MMP15P51511 669 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 CDC42P60953 191 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 CCL8P80075 99 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 SLC3A1Q07837 685 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 DBPQ10586 325 aaPredicted RBP12.56□□□□□ -0.4
CHD1-202ENST00000414220 APOFQ13790 326 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 GGTLC2Q14390 218 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 TSTQ16762 297 aaKnown RBP12.56□□□□□ -0.4
CHD1-202ENST00000414220 SLX4IPQ5VYV7 408 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 FBXW12Q6X9E4 464 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 PGAP1Q75T13 922 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 ZNF283Q8N7M2 679 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 THEM6Q8WUY1 208 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 ELMOD3Q96FG2 381 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 CIB1Q99828 191 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 C9orf16Q9BUW7 83 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 RIBC2Q9H4K1 309 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 GSX1Q9H4S2 264 aaPredicted RBP12.56□□□□□ -0.4
CHD1-202ENST00000414220 MARCH7Q9H992 704 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 S100A14Q9HCY8 104 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 PNRC2Q9NPJ4 139 aaKnown RBP12.56□□□□□ -0.4
CHD1-202ENST00000414220 NOP16Q9Y3C1 178 aaKnown RBP12.56□□□□□ -0.4
CHD1-202ENST00000414220 TMEM14AQ9Y6G1 99 aa12.56□□□□□ -0.4
CHD1-202ENST00000414220 SLC22A31A6NKX4 558 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 LY6G6DO95868 133 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 HPXP02790 462 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 H2BFMP0C1H6 154 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 TNFRSF1AP19438 455 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 GIFP27352 417 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 MAGEB1P43366 347 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 GPR6P46095 362 aaPredicted RBP12.55□□□□□ -0.4
CHD1-202ENST00000414220 ALDH3A2P51648 485 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 PPP2R2BQ00005 443 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 HFEQ30201 348 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 KRTAP27-1Q3LI81 207 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 KCTD18Q6PI47 426 aaPredicted RBP12.55□□□□□ -0.4
CHD1-202ENST00000414220 LYPD4Q6UWN0 246 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 COLCA1Q6ZS62 124 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 MRPL21Q7Z2W9 205 aaKnown RBP12.55□□□□□ -0.4
CHD1-202ENST00000414220 GID4Q8IVV7 300 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 TCEANCQ8N8B7 351 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 OR13G1Q8NGZ3 307 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 TMEM163Q8TC26 289 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 TIMD4Q96H15 378 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 TEAD3Q99594 435 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 ABHD6Q9BV23 337 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 OPA3Q9H6K4 179 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 LAMP5Q9UJQ1 280 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 MED13LQ71F56 2210 aa12.55□□□□□ -0.4
CHD1-202ENST00000414220 ARFGEF3Q5TH69 2177 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 HIVEP1P15822 2718 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 H3BNX3 289 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 BAG2O95816 211 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 IGHV1-46P01743 117 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 ADH4P08319 380 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 CRYBB2P43320 205 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 GZMKP49863 264 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 PRKXP51817 358 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 CHN2P52757 468 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 TNFAIP6P98066 277 aaPredicted RBP12.54□□□□□ -0.4
CHD1-202ENST00000414220 NXNL2Q5VZ03 156 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 SPATC1Q76KD6 591 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 SLC16A9Q7RTY1 509 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 PEG10Q86TG7 708 aaKnown RBP12.54□□□□□ -0.4
CHD1-202ENST00000414220 TIGD4Q8IY51 512 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 MAPK1IP1LQ8NDC0 245 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 OR8G5Q8NG78 346 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms