RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 A0A1W2PPK0 400 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 OR2M5A3KFT3 312 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 IFITM5A6NNB3 132 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 ZIC3O60481 467 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 SRSF10O75494 262 aaKnown RBP15.09■□□□□ 0.01
PTPRC-206ENST00000413409 VAMP5O95183 116 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 CALCBP10092 127 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 TCEA1P23193 301 aaKnown RBP15.09■□□□□ 0.01
PTPRC-206ENST00000413409 RANBP1P43487 201 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 PITPNBP48739 271 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 CLRN1P58418 232 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 CSNK2A1P68400 391 aaPredicted RBP15.09■□□□□ 0.01
PTPRC-206ENST00000413409 UBE2NLQ5JXB2 153 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 ACER2Q5QJU3 275 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 ZNF468Q5VIY5 522 aaPredicted RBP15.09■□□□□ 0.01
PTPRC-206ENST00000413409 MZT2BQ6NZ67 158 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 OR10H5Q8NGA6 315 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 FOXN4Q96NZ1 517 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 PIGQQ9BRB3 760 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 C11orf54Q9H0W9 315 aaPredicted RBP15.09■□□□□ 0.01
PTPRC-206ENST00000413409 TCF7L1Q9HCS4 588 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 BRD7Q9NPI1 651 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 NPAP1Q9NZP6 1156 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 V9GY05 133 aa15.09■□□□□ 0.01
PTPRC-206ENST00000413409 IGKV1D-43A0A0B4J1Z2 117 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 A0A0G2JMP0 313 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 A0A0X1KG70 313 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 NKX2-6A6NCS4 301 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 E9PLN8 166 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 BOLA2-SMG1P6H3BVE0 249 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 SSX4O60224 188 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 UBL3O95164 117 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 PAHP00439 452 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 SNRPBP14678 240 aaKnown RBP15.08■□□□□ 0
PTPRC-206ENST00000413409 ZNF43P17038 809 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 LAP3P28838 519 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 DCTDP32321 178 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 MAP2K3P46734 347 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 RAC1P63000 192 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 H3F3AP84243 136 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 HIST3H3Q16695 136 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 SLC25A47Q6Q0C1 308 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 STAC2Q6ZMT1 411 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.08■□□□□ 0
PTPRC-206ENST00000413409 LRRTM1Q86UE6 522 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 IL17RDQ8NFM7 739 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 OR4M2Q8NGB6 313 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 OR5H6Q8NGV6 325 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 ZNF671Q8TAW3 534 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 LGALS14Q8TCE9 139 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 RNF133Q8WVZ7 376 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 C11orf40Q8WZ69 217 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 MCHR2Q969V1 340 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 VKORC1Q9BQB6 163 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 NAA11Q9BSU3 229 aaPredicted RBP15.08■□□□□ 0
PTPRC-206ENST00000413409 WACQ9BTA9 647 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 MRPS18CQ9Y3D5 142 aaKnown RBP15.08■□□□□ 0
PTPRC-206ENST00000413409 ETV7Q9Y603 341 aa15.08■□□□□ 0
PTPRC-206ENST00000413409 OR5H15A6NDH6 313 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 ZNF814B7Z6K7 855 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 PLA2G10O15496 165 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 SLC43A1O75387 559 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 WNT11O96014 354 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 FSTP19883 344 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 ACHEP22303 614 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 PITPNAQ00169 270 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 KCNMB1Q16558 191 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 KRTCAP3Q53RY4 240 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 TMEM225Q6GV28 225 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 OR7E24Q6IFN5 339 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 MDGA2Q7Z553 956 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 FGD2Q7Z6J4 655 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 SYT9Q86SS6 491 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 RDH10Q8IZV5 341 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 TRIM63Q969Q1 353 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 GNRHR2Q96P88 292 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 ANKRD10Q9NXR5 420 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 KCNN3Q9UGI6 736 aa15.07■□□□□ 0
PTPRC-206ENST00000413409 A0A1B0GTH9 108 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 LRRC3CA6NJW4 275 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 CTDSPLO15194 276 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 TOXO94900 526 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 MPZL1O95297 269 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 SOX2P48431 317 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 MEOX1P50221 254 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 ZNF133P52736 654 aaPredicted RBP15.06■□□□□ 0
PTPRC-206ENST00000413409 B3GALT5-AS1P59052 145 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 MFGE8Q08431 387 aaPredicted RBP15.06■□□□□ 0
PTPRC-206ENST00000413409 DCXRQ7Z4W1 244 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 GPAT4Q86UL3 456 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 CELF2-AS1Q8N7Q2 184 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 WFDC11Q8NEX6 87 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 ENKURQ8TC29 256 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 TSEN15Q8WW01 171 aaKnown RBP15.06■□□□□ 0
PTPRC-206ENST00000413409 TMEM106AQ96A25 262 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 RFT1Q96AA3 541 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 EMC6Q9BV81 110 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 OR2B2Q9GZK3 357 aa15.06■□□□□ 0
PTPRC-206ENST00000413409 RBFOX1Q9NWB1 397 aaKnown RBP15.06■□□□□ 0
PTPRC-206ENST00000413409 CYB5R1Q9UHQ9 305 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms