RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 UNQ9370/PRO34162Q6UXP9 181 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 NPSR1Q6W5P4 371 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF620Q6ZNG0 422 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 TMEM179Q6ZVK1 233 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 MRPL55Q7Z7F7 128 aaKnown RBP3.48□□□□□ -1.85
BRCA1-204ENST00000412061 CDC20BQ86Y33 519 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 FBXO16Q8IX29 292 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-204ENST00000412061 ZADH2Q8N4Q0 377 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 SFXN5Q8TD22 340 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 TSG101Q99816 390 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 OSBPL11Q9BXB4 747 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 PORCNQ9H237 461 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 ABCB10Q9NRK6 738 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.48□□□□□ -1.85
BRCA1-204ENST00000412061 USE1Q9NZ43 259 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 KLHL21Q9UJP4 597 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 CES1P1Q9UKY3 287 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 UGT2A1Q9Y4X1 527 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 ABCB11O95342 1321 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 DENND4AQ7Z401 1863 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 PLB1Q6P1J6 1458 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 IGHV1OR15-1A0A075B7D0 117 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 TRAV9-2A0A087WT02 112 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 ANKRD65E5RJM6 399 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 HCRTR1O43613 425 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 SULT1B1O43704 296 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 DEXIO95424 95 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 PSMB5P28074 263 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 FMO3P31513 532 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 EVI2BP34910 448 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 CDKN2CP42773 168 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 RGS6P49758 472 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 RPL14P50914 215 aaKnown RBP3.47□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF121P58317 390 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-204ENST00000412061 PRKCDQ05655 676 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF763Q0D2J5 394 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 LY6DQ14210 128 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 RBM48Q5RL73 367 aaKnown RBP3.47□□□□□ -1.85
BRCA1-204ENST00000412061 FAM27D1Q5T7N8 215 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 C1orf146Q5VVC0 180 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 RESP18Q5W5W9 173 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF613Q6PF04 617 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 FAM19A1Q7Z5A9 133 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 CA13Q8N1Q1 262 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 CBR4Q8N4T8 237 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 OR5T1Q8NG75 326 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 OR2L5Q8NG80 312 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 OR52E2Q8NGJ4 325 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 OR9G1Q8NH87 305 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 OR5AK3PQ8NH89 298 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 ITLN1Q8WWA0 313 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 OR5P2Q8WZ92 322 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 RORBQ92753 470 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 TMEM230Q96A57 120 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 FGGYQ96C11 551 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 FLYWCH2Q96CP2 140 aaKnown RBP3.47□□□□□ -1.85
BRCA1-204ENST00000412061 OR5M11Q96RB7 305 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 P2RX4Q99571 388 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 FBXO8Q9NRD0 319 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF107Q9UII5 783 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-204ENST00000412061 FBXL3Q9UKT7 428 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 CFL2Q9Y281 166 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 ASF1AQ9Y294 204 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 SNX24Q9Y343 169 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 KLF12Q9Y4X4 402 aa3.47□□□□□ -1.85
BRCA1-204ENST00000412061 NDUFAF8A1L188 74 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 CRLF1O75462 422 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 VENTXO95231 258 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 PSMG1O95456 288 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 AK4P27144 223 aaPredicted RBP3.46□□□□□ -1.85
BRCA1-204ENST00000412061 COILP38432 576 aaPredicted RBP3.46□□□□□ -1.85
BRCA1-204ENST00000412061 UBE2E1P51965 193 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 RPL18AQ02543 176 aaKnown RBP3.46□□□□□ -1.85
BRCA1-204ENST00000412061 STX5Q13190 355 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 MED21Q13503 144 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 ASAH1Q13510 395 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 AQP6Q13520 282 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 RAB31Q13636 194 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF266Q14584 549 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 GUSBP1Q15486 140 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 TGIF1Q15583 401 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 UAP1Q16222 522 aaPredicted RBP3.46□□□□□ -1.85
BRCA1-204ENST00000412061 ZSCAN26Q16670 478 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 MRGPRG-AS1Q2M3A8 158 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 GOLGA7BQ2TAP0 167 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 C2CD6Q53TS8 623 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 OR2B11Q5JQS5 317 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 GCSAMLQ5JQS6 135 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 TMEM31Q5JXX7 168 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 CEP85LQ5SZL2 805 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 FAAP20Q6NZ36 180 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 FAM173BQ6P4H8 233 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 Q6ZT83 130 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 NAXDQ8IW45 347 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 FAM71AQ8IYT1 594 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 CADM2Q8N3J6 435 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 ATPAF2Q8N5M1 289 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 OR51G1Q8NGK1 321 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 UBE2E2Q96LR5 201 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF488Q96MN9 340 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms