RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 HLA-DMAP28067 261 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 GPX4P36969 197 aaPredicted RBP-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 YAP1P46937 504 aaKnown RBP-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 TATDN3Q17R31 274 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 APOBEC3HQ6NTF7 200 aaKnown RBP-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 SLC25A48Q6ZT89 311 aaKnown RBP-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 CSGALNACT2Q8N6G5 542 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 OR2Z1Q8NG97 314 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 OR1S2Q8NGQ3 325 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 SCFD1Q8WVM8 642 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 PLEKHA8Q96JA3 519 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 CNDP1Q96KN2 507 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 PSKH2Q96QS6 385 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 TMEM243Q9BU79 118 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 TRIM62Q9BVG3 475 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 NUDT9Q9BW91 350 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 NMRAL1Q9HBL8 299 aa-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 CSDC2Q9Y534 153 aaKnown RBP-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 BAZ1BQ9UIG0 1483 aaKnown RBP-0.04□□□□□ -2.42
RNU2-55P-201ENST00000411146 IGKV1OR2-108A0A075B7D4 117 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 IGKV1-6A0A0C4DH72 117 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 NUPL2O15504 423 aaKnown RBP-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 SEC22BO75396 215 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 SEMA3DO95025 777 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 C2P06681 752 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 PABPC4LP0CB38 370 aaKnown RBP-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 EPB41P11171 864 aaKnown RBP-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 CHI3L1P36222 383 aaPredicted RBP-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 HSD17B2P37059 387 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 TGM4P49221 684 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 CSNK1EP49674 416 aaKnown RBP-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 FOXA1P55317 472 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 SYNJ2BPP57105 145 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 TAS2R43P59537 309 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 RPS23P62266 143 aaKnown RBP-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 SCGB2A2Q13296 93 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 CCDC92Q53HC0 331 aaPredicted RBP-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 ZFAND6Q6FIF0 208 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 TCF24Q7RTU0 167 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 HDDC3Q8N4P3 179 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 SDR9C7Q8NEX9 313 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 OR1J4Q8NGS1 313 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 OR2T34Q8NGX1 318 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 OR5P3Q8WZ94 311 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 C10orf35Q96D05 121 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 TCEANC2Q96MN5 208 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 ZNF75AQ96N20 296 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 KRT23Q9C075 422 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 ABCG5Q9H222 651 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 COQ10BQ9H8M1 238 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 DYRK4Q9NR20 520 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 TRMT112Q9UI30 125 aaKnown RBP-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 MOSPD1Q9UJG1 213 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 PTBP2Q9UKA9 531 aaKnown RBP-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 ING4Q9UNL4 249 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 SPATA31E1Q6ZUB1 1445 aa-0.05□□□□□ -2.42
RNU2-55P-201ENST00000411146 FN1P02751 2386 aaKnown RBP-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 ZNF860A6NHJ4 632 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 C9JVG2 144 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 CDC40O60508 579 aaKnown RBP eCLIP-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 S1PR2O95136 353 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 IGKV1-39P01597 117 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 IGKV1D-39P04432 117 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 HSMCR30P0CW71 290 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 CGB7P0DN87 165 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 GAP43P17677 238 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 GGT1P19440 569 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 GZMHP20718 246 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 PRKACBP22694 351 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 TMED10P49755 219 aaKnown RBP-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 RAB9AP51151 201 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 PRR3P79522 188 aaKnown RBP-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 CBX1P83916 185 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 MRPL28Q13084 256 aaKnown RBP-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 ILKQ13418 452 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 DGCR6Q14129 220 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 HES1Q14469 280 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 ZNF266Q14584 549 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 MESDQ14696 234 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 TSC22D1Q15714 1073 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 GPR107Q5VW38 600 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 ANKRD26P1Q6NSI1 321 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 KRTAP19-3Q7Z4W3 81 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 PSTKQ8IV42 348 aaKnown RBP-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 LIX1Q8N485 282 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 EIF4E3Q8N5X7 224 aaKnown RBP-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 DNAAF3Q8N9W5 541 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 OR1L6Q8NGR2 347 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 SLC2A14Q8TDB8 520 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 RBPMSQ93062 196 aaKnown RBP-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 PKNOX2Q96KN3 472 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 RBM14Q96PK6 669 aaKnown RBP-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 OR5B12Q96R08 314 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 GPA33Q99795 319 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 TXNDC17Q9BRA2 123 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 PARD6BQ9BYG5 372 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 ANKRD19PQ9H560 264 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 TMEM27Q9HBJ8 222 aa-0.06□□□□□ -2.42
RNU2-55P-201ENST00000411146 RNF14Q9UBS8 474 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms