RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 BEND6Q5SZJ8 279 aaPredicted RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ARMC4Q5T2S8 1044 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 NCR3LG1Q68D85 454 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 OGFOD2Q6N063 350 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 REEP3Q6NUK4 255 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 UNQ9370/PRO34162Q6UXP9 181 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 LINC00114Q6XXX2 140 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 LIAT1Q6ZQX7 453 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MSANTD1Q6ZTZ1 278 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 FOXL2NBQ6ZUU3 175 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MEPCEQ7L2J0 689 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLC36A1Q7Z2H8 476 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 COMTD1Q86VU5 262 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ARMC8Q8IUR7 673 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 IFT20Q8IY31 132 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 Q8N2B8 174 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 C10orf111Q8N326 155 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF781Q8N8C0 355 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 BOLLQ8N9W6 283 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 PLPP7Q8NBV4 271 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 LY6G5BQ8NDX9 201 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 BHLHE23Q8NDY6 225 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MNS1Q8NEH6 495 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 SDR9C7Q8NEX9 313 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 Q8NFD4 153 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 NFKBIDQ8NI38 313 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 C8orf46Q8TAG6 207 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 TCP10LQ8TDR4 215 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ASB10Q8WXI3 467 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ST8SIA4Q92187 359 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 HDAC2Q92769 488 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 TNFRSF14Q92956 283 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 APOBEC3DQ96AK3 386 aaPredicted RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 APOPT1Q96IL0 206 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ITCHQ96J02 903 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MPP4Q96JB8 637 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MAP6Q96JE9 813 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MAELQ96JY0 434 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 DDOQ99489 341 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MCHR1Q99705 422 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 NKX3-1Q99801 234 aaPredicted RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ECSITQ9BQ95 431 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 DCTN5Q9BTE1 182 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MCRIP2Q9BUT9 160 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ALG12Q9BV10 488 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 CHID1Q9BWS9 393 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 HCAR1Q9BXC0 346 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 CDCA4Q9BXL8 241 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 PRSS22Q9GZN4 317 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 WNT10AQ9GZT5 417 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLC22A4Q9H015 551 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MEGF9Q9H1U4 602 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 TXNIPQ9H3M7 391 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 POFUT1Q9H488 388 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 METTL8Q9H825 291 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 SMURF1Q9HCE7 757 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 PALMDQ9NP74 551 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 POLE4Q9NR33 117 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 C20orf141Q9NUB4 165 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 UFSP2Q9NUQ7 469 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 AIG1Q9NVV5 245 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 PTTG3PQ9NZH4 202 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLC17A7Q9P2U7 560 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 KAAG1Q9UBP8 84 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ATPIF1Q9UII2 106 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 RPUSD1Q9UJJ7 312 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLC7A7Q9UM01 511 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 AURKCQ9UQB9 309 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ANGPT4Q9Y264 503 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 SF3B6Q9Y3B4 125 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 RAP2CQ9Y3L5 183 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 TRBV23-1A0A0A0MS06 115 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A1B0GWJ7 208 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A1W2PQ09 198 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 hCG_1807616A0A1W2PRN6 198 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 TCRBV4S1A1TA0A5B7 111 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 TLDC2A0PJX2 215 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 HTR3EA5X5Y0 456 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 A6NIZ1 184 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 A6NLC8 198 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 CPSF4LA6NMK7 179 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 H3BUI4 141 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 M0R1W7 72 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 M0R3H8 397 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 F2RL2O00254 374 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 XKRYO14609 159 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 RER1O15258 196 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 HDAC3O15379 428 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 NDUFB3O43676 98 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 ITM2AO43736 263 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 CHST1O43916 411 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 GMDSO60547 372 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 RAMP3O60896 148 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 SPAG7O75391 227 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLC22A3O75751 556 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR7A10O76100 309 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 GLCEO94923 617 aa1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 PTBP3O95758 552 aaKnown RBP1.92□□□□□ -2.1
RNU4-53P-201ENST00000410828 IGF2P01344 180 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms