RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 ANKHD1Q8IWZ3 2542 aaKnown RBP13.15□□□□□ -0.3
LSM5-207ENST00000410044 TMEM129A0AVI4 362 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 F5H5K5 113 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 M0R135 149 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 MAGEB4O15481 346 aaPredicted RBP13.15□□□□□ -0.3
LSM5-207ENST00000410044 CD3EP07766 207 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 HTR1AP08908 422 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 CCL2P13500 99 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 NR4A1P22736 598 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 TUBG1P23258 451 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 WNT5AP41221 380 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 RGS6P49758 472 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 MMP16P51512 607 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 CHN2P52757 468 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 NKX6-1P78426 367 aaPredicted RBP13.15□□□□□ -0.3
LSM5-207ENST00000410044 GALK2Q01415 458 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 HGFACQ04756 655 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 MRPL28Q13084 256 aaKnown RBP13.15□□□□□ -0.3
LSM5-207ENST00000410044 LIPNQ5VXI9 398 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 ADAM5Q6NVV9 412 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 FDX2Q6P4F2 183 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 ARL9Q6T311 187 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 SPATC1Q76KD6 591 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 PAQR4Q8N4S7 273 aaPredicted RBP13.15□□□□□ -0.3
LSM5-207ENST00000410044 NUP37Q8NFH4 326 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 OR52N1Q8NH53 320 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 HAVCR2Q8TDQ0 301 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 RNF166Q96A37 237 aaPredicted RBP13.15□□□□□ -0.3
LSM5-207ENST00000410044 ZNF799Q96GE5 643 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 TUBG2Q9NRH3 451 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 EIF3KQ9UBQ5 218 aaKnown RBP13.15□□□□□ -0.3
LSM5-207ENST00000410044 PLEKHB1Q9UF11 243 aaPredicted RBP13.15□□□□□ -0.3
LSM5-207ENST00000410044 CLEC2DQ9UHP7 191 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 IKZF2Q9UKS7 526 aa13.15□□□□□ -0.3
LSM5-207ENST00000410044 DOPEY2Q9Y3R5 2298 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 A6NNC1 897 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 SHISA9B4DS77 424 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 PSMD9O00233 223 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 ABCD4O14678 606 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 COX6B1P14854 86 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 HSD11B1P28845 292 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 RAD52P43351 418 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 PRKXP51817 358 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 UCP2P55851 309 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 OR12D2P58182 307 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 PSMA6P60900 246 aaKnown RBP13.14□□□□□ -0.31
LSM5-207ENST00000410044 UNQ6126/PRO20091Q6UXV3 157 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 TMPRSS11AQ6ZMR5 421 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 NAA40Q86UY6 237 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 KLHL36Q8N4N3 616 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 YIPF7Q8N8F6 280 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 APOBEC3DQ96AK3 386 aaPredicted RBP13.14□□□□□ -0.31
LSM5-207ENST00000410044 KCNS3Q9BQ31 491 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 BCL2L14Q9BZR8 327 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 SP140LQ9H930 580 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 ERGIC3Q9Y282 383 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 GRIP1Q9Y3R0 1128 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 SPEF1Q9Y4P9 236 aa13.14□□□□□ -0.31
LSM5-207ENST00000410044 PKDREJQ9NTG1 2253 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 J3QLW9 94 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 TNFAIP8O95379 198 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 ZNF19P17023 458 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 CCNOP22674 350 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 EEF1B2P24534 225 aaKnown RBP13.13□□□□□ -0.31
LSM5-207ENST00000410044 GLRXP35754 106 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 CX3CR1P49238 355 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 ZNF829Q3KNS6 432 aaPredicted RBP13.13□□□□□ -0.31
LSM5-207ENST00000410044 TP53I3Q53FA7 332 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 ZNF283Q8N7M2 679 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 LILRB1Q8NHL6 650 aaPredicted RBP13.13□□□□□ -0.31
LSM5-207ENST00000410044 RORBQ92753 470 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 C14orf79Q96F83 325 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 PELI1Q96FA3 418 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 PIK3IP1Q96FE7 263 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 C4orf36Q96KX1 117 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 COG8Q96MW5 612 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 HS3ST6Q96QI5 342 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 DOK1Q99704 481 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 TTTY10Q9BZA0 68 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 ZNF696Q9H7X3 374 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 ISG20L2Q9H9L3 353 aaKnown RBP13.13□□□□□ -0.31
LSM5-207ENST00000410044 FAM206AQ9NX38 181 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 BABAM2Q9NXR7 383 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 RNF115Q9Y4L5 304 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 R4GMQ9 66 aa13.13□□□□□ -0.31
LSM5-207ENST00000410044 FASNP49327 2511 aaKnown RBP13.12□□□□□ -0.31
LSM5-207ENST00000410044 LRRK2Q5S007 2527 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 TMEM269A0A1B0GVZ9 245 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 ATP6V1G2-DDX39BF2Z307 99 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 SMPD2O60906 423 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 CTAG2O75638 210 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 PNPP00491 289 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 NGFP01138 241 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 MT-ND2P03891 347 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 MT-ND5P03915 603 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 TGM4P49221 684 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 ZNF121P58317 390 aaPredicted RBP13.12□□□□□ -0.31
LSM5-207ENST00000410044 SPOCK1Q08629 439 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 ACSM1Q08AH1 577 aa13.12□□□□□ -0.31
LSM5-207ENST00000410044 OR2G6Q5TZ20 316 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms