RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ABCB10Q9NRK6 738 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 CFL2Q9Y281 166 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 ASF1AQ9Y294 204 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 KLF12Q9Y4X4 402 aa3.77□□□□□ -1.81
LSM5-205ENST00000409952 A0A0B4J2E0 115 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 TMEM210A6NLX4 147 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 EPM2AB3EWF7 344 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 CDC40O60508 579 aaKnown RBP eCLIP3.76□□□□□ -1.81
LSM5-205ENST00000409952 CRLF1O75462 422 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 SNAPINO95295 136 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 C6orf47O95873 294 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 PGA5P0DJD9 388 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 LIPCP11150 499 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 TCP1P17987 556 aaKnown RBP3.76□□□□□ -1.81
LSM5-205ENST00000409952 RPL34P49207 117 aaKnown RBP3.76□□□□□ -1.81
LSM5-205ENST00000409952 KRTAP10-6P60371 365 aaPredicted RBP3.76□□□□□ -1.81
LSM5-205ENST00000409952 RUNX3Q13761 415 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 PAGE3Q5JUK9 113 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 SAPCD1Q5SSQ6 148 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 IDNKQ5T6J7 187 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 KHDRBS2Q5VWX1 349 aaKnown RBP3.76□□□□□ -1.81
LSM5-205ENST00000409952 NAXDQ8IW45 347 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 CBR4Q8N4T8 237 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 TMEM252Q8N6L7 170 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 ZFP41Q8N8Y5 198 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 NKAPP1Q8N9T2 125 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 OR6X1Q8NH79 312 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 FANK1Q8TC84 345 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 DNAJB3Q8WWF6 145 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 PSMB7Q99436 277 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 RSG1Q9BU20 258 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 OSBPL11Q9BXB4 747 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 SDF2L1Q9HCN8 221 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.76□□□□□ -1.81
LSM5-205ENST00000409952 NLE1Q9NVX2 485 aaPredicted RBP3.76□□□□□ -1.81
LSM5-205ENST00000409952 USE1Q9NZ43 259 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 CLCF1Q9UBD9 225 aa3.76□□□□□ -1.81
LSM5-205ENST00000409952 ABCB11O95342 1321 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 IGHV3OR16-10A0A075B7F0 116 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 IGHV3-35A0A0C4DH35 117 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 GOLGA8IPA6NC78 632 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 GOLGA8JA6NMD2 632 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 GOLGA8KD6RF30 607 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 PRSS44E7EML9 344 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 GOLGA8MH3BSY2 632 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 ZNF593O00488 134 aaPredicted RBP3.75□□□□□ -1.81
LSM5-205ENST00000409952 ZNF780AO75290 641 aaPredicted RBP3.75□□□□□ -1.81
LSM5-205ENST00000409952 PSIP1O75475 530 aaKnown RBP3.75□□□□□ -1.81
LSM5-205ENST00000409952 UTS2O95399 124 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 IGHV3-48P01763 117 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 SEMG1P04279 462 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 GKN3PP0CG01 181 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 GOLGA8HP0CJ92 632 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 ATF6P18850 670 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 F2RP25116 425 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 PFN2P35080 140 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 RGS6P49758 472 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 UBE2E1P51965 193 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 MAGOHP61326 146 aaKnown RBP3.75□□□□□ -1.81
LSM5-205ENST00000409952 STX4Q12846 297 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 AQP6Q13520 282 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 PSG5Q15238 335 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 GUSBP1Q15486 140 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 ZNHIT3Q15649 155 aaPredicted RBP3.75□□□□□ -1.81
LSM5-205ENST00000409952 COQ5Q5HYK3 327 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 GCSAMLQ5JQS6 135 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 TIMM23BQ5SRD1 257 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 FAM27D1Q5T7N8 215 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 ANKRD22Q5VYY1 191 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 FAM220AQ7Z4H9 259 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 FAM19A1Q7Z5A9 133 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 MRPL52Q86TS9 123 aaKnown RBP3.75□□□□□ -1.81
LSM5-205ENST00000409952 ZNF589Q86UQ0 364 aaPredicted RBP3.75□□□□□ -1.81
LSM5-205ENST00000409952 RALGPS2Q86X27 583 aaPredicted RBP3.75□□□□□ -1.81
LSM5-205ENST00000409952 ZNF677Q86XU0 584 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 HIPK1Q86Z02 1210 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 DAW1Q8N136 415 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 ATP6V1C2Q8NEY4 427 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 OR10W1Q8NGF6 305 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 OR51G1Q8NGK1 321 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 OR1N2Q8NGR9 330 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 OR2L2Q8NH16 312 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 CDC26Q8NHZ8 85 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 RNASEH2CQ8TDP1 164 aaKnown RBP3.75□□□□□ -1.81
LSM5-205ENST00000409952 FBXO17Q96EF6 278 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 SGTBQ96EQ0 304 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 UBE2E2Q96LR5 201 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 ZNF184Q99676 751 aaPredicted RBP3.75□□□□□ -1.81
LSM5-205ENST00000409952 RBBP8Q99708 897 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 C19orf24Q9BVV8 132 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 PARD6GQ9BYG4 376 aaPredicted RBP3.75□□□□□ -1.81
LSM5-205ENST00000409952 ING2Q9H160 280 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 Q9H3A6 140 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 ACOT13Q9NPJ3 140 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 IFT46Q9NQC8 304 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 SNX24Q9Y343 169 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 SLC25A15Q9Y619 301 aa3.75□□□□□ -1.81
LSM5-205ENST00000409952 PLB1Q6P1J6 1458 aa3.74□□□□□ -1.81
LSM5-205ENST00000409952 HIDE1A8MVS5 230 aa3.74□□□□□ -1.81
LSM5-205ENST00000409952 HDAC3O15379 428 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms