RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TMEM200AQ86VY9 491 aa17.82■□□□□ 0.44
C4orf48-202ENST00000409860 ZNF295-AS1Q8N0V1 137 aa17.82■□□□□ 0.44
C4orf48-202ENST00000409860 NUP37Q8NFH4 326 aa17.82■□□□□ 0.44
C4orf48-202ENST00000409860 MYDGFQ969H8 173 aa17.82■□□□□ 0.44
C4orf48-202ENST00000409860 BCL2L14Q9BZR8 327 aa17.82■□□□□ 0.44
C4orf48-202ENST00000409860 CLEC4MQ9H2X3 399 aaPredicted RBP17.82■□□□□ 0.44
C4orf48-202ENST00000409860 FKBP14Q9NWM8 211 aa17.82■□□□□ 0.44
C4orf48-202ENST00000409860 CHCHD3Q9NX63 227 aaKnown RBP17.82■□□□□ 0.44
C4orf48-202ENST00000409860 EXOSC1Q9Y3B2 195 aaKnown RBP17.82■□□□□ 0.44
C4orf48-202ENST00000409860 PCDHGB5Q9Y5G0 923 aa17.82■□□□□ 0.44
C4orf48-202ENST00000409860 METTL15A6NJ78 407 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 J3QW42 95 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 ICMTO60725 284 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 SMPD2O60906 423 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 SULT1C4O75897 302 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 FAM157BP0CG42 384 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 WNT5AP41221 380 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 UCP2P55851 309 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 GALEQ14376 348 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 RSPO1Q2MKA7 263 aaPredicted RBP17.81■□□□□ 0.44
C4orf48-202ENST00000409860 ZNF829Q3KNS6 432 aaPredicted RBP17.81■□□□□ 0.44
C4orf48-202ENST00000409860 ZNF787Q6DD87 383 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 YIPF7Q8N8F6 280 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 ABHD4Q8TB40 342 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 DOK1Q99704 481 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 ALG8Q9BVK2 526 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 OR51B6Q9H340 312 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 SP140LQ9H930 580 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 TBCCD1Q9NVR7 557 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 ERVK13-1Q9NX77 482 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 MRM2Q9UI43 246 aaKnown RBP17.81■□□□□ 0.44
C4orf48-202ENST00000409860 PTPN13Q12923 2485 aa17.81■□□□□ 0.44
C4orf48-202ENST00000409860 PTGES3LE9PB15 166 aa17.8■□□□□ 0.44
C4orf48-202ENST00000409860 CRHBPP24387 322 aa17.8■□□□□ 0.44
C4orf48-202ENST00000409860 DCTDP32321 178 aa17.8■□□□□ 0.44
C4orf48-202ENST00000409860 PSMA6P60900 246 aaKnown RBP17.8■□□□□ 0.44
C4orf48-202ENST00000409860 NKX6-1P78426 367 aaPredicted RBP17.8■□□□□ 0.44
C4orf48-202ENST00000409860 ZNF672Q499Z4 452 aaPredicted RBP17.8■□□□□ 0.44
C4orf48-202ENST00000409860 CDONQ4KMG0 1287 aa17.8■□□□□ 0.44
C4orf48-202ENST00000409860 RFPL4BQ6ZWI9 263 aa17.8■□□□□ 0.44
C4orf48-202ENST00000409860 KCTD20Q7Z5Y7 419 aa17.8■□□□□ 0.44
C4orf48-202ENST00000409860 LHFPL3Q86UP9 236 aa17.8■□□□□ 0.44
C4orf48-202ENST00000409860 C1orf174Q8IYL3 243 aa17.8■□□□□ 0.44
C4orf48-202ENST00000409860 ZNF101Q8IZC7 436 aa17.8■□□□□ 0.44
C4orf48-202ENST00000409860 AKAP1Q92667 903 aaKnown RBP eCLIP17.8■□□□□ 0.44
C4orf48-202ENST00000409860 APOBEC3DQ96AK3 386 aaPredicted RBP17.8■□□□□ 0.44
C4orf48-202ENST00000409860 COG8Q96MW5 612 aa17.8■□□□□ 0.44
C4orf48-202ENST00000409860 GNG8Q9UK08 70 aa17.8■□□□□ 0.44
C4orf48-202ENST00000409860 CADP27708 2225 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 VSTM5A8MXK1 200 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 MAGEB4O15481 346 aaPredicted RBP17.79■□□□□ 0.44
C4orf48-202ENST00000409860 LCATP04180 440 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 LCKP06239 509 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 ANXA2P07355 339 aaKnown RBP17.79■□□□□ 0.44
C4orf48-202ENST00000409860 TACSTD2P09758 323 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 GLRXP35754 106 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 TP53I3Q53FA7 332 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 ZNF684Q5T5D7 378 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 VHLLQ6RSH7 139 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 OR5L1Q8NGL2 311 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 NEUROG1Q92886 237 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 C1QTNF5Q9BXJ0 243 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 YTHDF1Q9BYJ9 559 aaKnown RBP17.79■□□□□ 0.44
C4orf48-202ENST00000409860 CA10Q9NS85 328 aa17.79■□□□□ 0.44
C4orf48-202ENST00000409860 CDK1P06493 297 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 SLC2A1P11166 492 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 ZNF121P58317 390 aaPredicted RBP17.78■□□□□ 0.44
C4orf48-202ENST00000409860 PPP1CBP62140 327 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 SLC35A2P78381 396 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 RGS7BPQ6MZT1 257 aaPredicted RBP17.78■□□□□ 0.44
C4orf48-202ENST00000409860 TMPRSS11AQ6ZMR5 421 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 EGFL6Q8IUX8 553 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 SYS1Q8N2H4 156 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 OR1J1Q8NGS3 322 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 DUSP21Q9H596 190 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 ZNF442Q9H7R0 627 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 CISD1Q9NZ45 108 aaKnown RBP17.78■□□□□ 0.44
C4orf48-202ENST00000409860 LRCH1Q9Y2L9 728 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 N6AMT1Q9Y5N5 214 aa17.78■□□□□ 0.44
C4orf48-202ENST00000409860 TMEM269A0A1B0GVZ9 245 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 A0A1W2PPR1 153 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 E7EQL1 145 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 J3QLW9 94 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 HS3ST1O14792 307 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 RGS10O43665 173 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 GPRIN2O60269 458 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 RPP14O95059 124 aaKnown RBP17.77■□□□□ 0.44
C4orf48-202ENST00000409860 NGFP01138 241 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 LIMS3P0CW19 117 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 LIMS4P0CW20 117 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 ZNF19P17023 458 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 TUBG1P23258 451 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 EEF1B2P24534 225 aaKnown RBP17.77■□□□□ 0.44
C4orf48-202ENST00000409860 C21orf33P30042 268 aaPredicted RBP17.77■□□□□ 0.44
C4orf48-202ENST00000409860 THBS4P35443 961 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 ETV1P50549 477 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 LIPNQ5VXI9 398 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 ZNF544Q6NX49 715 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 COLCA1Q6ZS62 124 aa17.77■□□□□ 0.44
C4orf48-202ENST00000409860 NAA40Q86UY6 237 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms