RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ATF6BQ99941 703 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 MOB1AQ9H8S9 216 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CRLF2Q9HC73 371 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ASH2LQ9UBL3 628 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 LHX6Q9UPM6 363 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ZSCAN5BA6NJL1 495 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 PRSS47A8MTI9 375 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 MKRN2OSH3BPM6 223 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 K7EM74 188 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 MRPL33O75394 65 aaKnown RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 RAF1P04049 648 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 OTX1P32242 354 aaPredicted RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 GRB2P62993 217 aaKnown RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 KRTAP27-1Q3LI81 207 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 TSPO2Q5TGU0 170 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 PLXDC2Q6UX71 529 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 SPATC1Q76KD6 591 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 SYT9Q86SS6 491 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 GJC3Q8NFK1 279 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 GPR148Q8TDV2 347 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 HTRA1Q92743 480 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF775Q96BV0 537 aaPredicted RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 KCTD12Q96CX2 325 aaKnown RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ALKBH3Q96Q83 286 aaPredicted RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 KCNS3Q9BQ31 491 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 RBM24Q9BX46 236 aaKnown RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 MIXL1Q9H2W2 232 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 EXO5Q9H790 373 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 NOX4Q9NPH5 578 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 GLRX2Q9NS18 164 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 OR52A1Q9UKL2 312 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CAMK2AQ9UQM7 478 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 SLC22A13Q9Y226 551 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CBY1Q9Y3M2 126 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CACNG2Q9Y698 323 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 OR14I1A6ND48 311 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ACOD1A6NK06 481 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 SLC22A20A6NK97 555 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 LOC110117498-PIK3R3F6TDL0 507 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CTDSP2O14595 271 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 RER1O15258 196 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 SS18L1O75177 396 aaPredicted RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 NCR1O76036 304 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 WISP2O76076 250 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 TGM6O95932 706 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 UBCP0CG48 685 aaKnown RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ACHEP22303 614 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CFPP27918 469 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CD40LGP29965 261 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 AGTR1P30556 359 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CAV3P56539 151 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 RAB14P61106 215 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF124Q15973 351 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 SGCAQ16586 387 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 TBR1Q16650 682 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 HSD17B12Q53GQ0 312 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 UTS2BQ765I0 119 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CHMP1BQ7LBR1 199 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 PRSS45Q7RTY3 260 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ELMOD2Q8IZ81 293 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 SLC38A6Q8IZM9 456 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF676Q8N7Q3 588 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 OR10AC1Q8NH08 325 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ACOT12Q8WYK0 555 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 FBXO17Q96EF6 278 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 GFI1Q99684 422 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 FOXB1Q99853 325 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 SLC7A10Q9NS82 523 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 NUFIP1Q9UHK0 495 aaKnown RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CLEC4AQ9UMR7 237 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 EDARQ9UNE0 448 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 POLR1DQ9Y2S0 133 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 EMC9Q9Y3B6 208 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CMAHPQ9Y471 501 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ASPMQ8IZT6 3477 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 MAP1BP46821 2468 aaKnown RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 FREM1Q5H8C1 2179 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 TMEM269A0A1B0GVZ9 245 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 TTLL8A6PVC2 850 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 RRP8O43159 456 aaKnown RBP4.84□□□□□ -1.63
EPHA4-202ENST00000409854 IGLV3-1P01715 115 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 TTRP02766 147 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 SRMP19623 302 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 FSTP19883 344 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 RAB3BP20337 219 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 APEX1P27695 318 aaKnown RBP4.84□□□□□ -1.63
EPHA4-202ENST00000409854 GNALP38405 381 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 GUCA1AP43080 201 aaPredicted RBP4.84□□□□□ -1.63
EPHA4-202ENST00000409854 UCNP55089 124 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 TMPRSS3P57727 454 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF45Q02386 682 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 CEACAM16Q2WEN9 425 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 SFXN4Q6P4A7 337 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 FGD2Q7Z6J4 655 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.84□□□□□ -1.63
EPHA4-202ENST00000409854 SLC22A24Q8N4F4 322 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 OR51A4Q8NGJ6 313 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 SARAFQ96BY9 339 aa4.84□□□□□ -1.63
EPHA4-202ENST00000409854 GMPPAQ96IJ6 420 aaPredicted RBP4.84□□□□□ -1.63
EPHA4-202ENST00000409854 KCNJ15Q99712 375 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms