RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 DNASE1L1P49184 302 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 CLDN17P56750 224 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 RAB25P57735 213 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 B3GALT5-AS1P59052 145 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 AIMP2Q13155 320 aaKnown RBP6.63□□□□□ -1.35
CXCR4-202ENST00000409817 MADCAM1Q13477 382 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 RAB11BQ15907 218 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 SLC36A2Q495M3 483 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 PLA1AQ53H76 456 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 TMEM69Q5SWH9 247 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 PDSS1Q5T2R2 415 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 ABHD17BQ5VST6 288 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 FAM166AQ6J272 317 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 KRT74Q7RTS7 529 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 LINC00346Q8IVM7 164 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 ZBTB8BQ8NAP8 495 aaPredicted RBP6.63□□□□□ -1.35
CXCR4-202ENST00000409817 CCDC54Q8NEL0 328 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 OR9K2Q8NGE7 335 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 OR6M1Q8NGM8 313 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 OR13C3Q8NGS6 347 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 OR6N1Q8NGY5 312 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 OR6F1Q8NGZ6 308 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 OR14L1PQ8NHC6 308 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 FCAMRQ8WWV6 532 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 RELTQ969Z4 430 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 PTX4Q96A99 478 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 ORAI1Q96D31 301 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 NELFAQ9H3P2 528 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 SEC61A2Q9H9S3 476 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 ZFP64Q9NPA5 681 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 DIABLOQ9NR28 239 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 CENPMQ9NSP4 180 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 STMN3Q9NZ72 180 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 FOXJ2Q9P0K8 574 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 B4GALT7Q9UBV7 327 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 MRPS7Q9Y2R9 242 aaKnown RBP6.63□□□□□ -1.35
CXCR4-202ENST00000409817 RBMX2Q9Y388 322 aaKnown RBP6.63□□□□□ -1.35
CXCR4-202ENST00000409817 NUBP2Q9Y5Y2 271 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 LHFPL6Q9Y693 200 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 EML6Q6ZMW3 1958 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 KMT2EQ8IZD2 1858 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 SDK2Q58EX2 2172 aa6.63□□□□□ -1.35
CXCR4-202ENST00000409817 A0A087WV48 116 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 A0A0J9YW62 118 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 LRRC3CA6NJW4 275 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.62□□□□□ -1.35
CXCR4-202ENST00000409817 INMT-MINDY4F8WBC2 141 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 LANCL1O43813 399 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 KRT33AO76009 404 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 DHFRP00374 187 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 APOC1P02654 83 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 OPN1LWP04000 364 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 CD3EP07766 207 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 ERCC1P07992 297 aaPredicted RBP6.62□□□□□ -1.35
CXCR4-202ENST00000409817 MSR1P21757 451 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 ENPP1P22413 925 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 HSD11B1P28845 292 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 ZNF84P51523 738 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 DGCR2P98153 550 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 OC90Q02509 493 aaPredicted RBP6.62□□□□□ -1.35
CXCR4-202ENST00000409817 SSBP1Q04837 148 aaKnown RBP6.62□□□□□ -1.35
CXCR4-202ENST00000409817 KLF9Q13886 244 aaPredicted RBP6.62□□□□□ -1.35
CXCR4-202ENST00000409817 TAF13Q15543 124 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 CSRP2Q16527 193 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 TATDN3Q17R31 274 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 NKPD1Q17RQ9 610 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 ODF4Q2M2E3 257 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 HES3Q5TGS1 186 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 B3GNTL1Q67FW5 361 aaPredicted RBP6.62□□□□□ -1.35
CXCR4-202ENST00000409817 ANKRD16Q6P6B7 361 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 DNM1P46Q6ZS02 220 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 LINGO2Q7L985 606 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 SERPINA12Q8IW75 414 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 WDFY1Q8IWB7 410 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 CDH26Q8IXH8 852 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 TMEM123Q8N131 208 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 GJC3Q8NFK1 279 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 ADAMTS17Q8TE56 1095 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 SLC7A6Q92536 515 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 PHF21AQ96BD5 680 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 THOC3Q96J01 351 aaKnown RBP6.62□□□□□ -1.35
CXCR4-202ENST00000409817 FER1L6-AS2Q96M78 137 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 SFXN2Q96NB2 322 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 OR2M2Q96R28 347 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 SMAD5Q99717 465 aaKnown RBP6.62□□□□□ -1.35
CXCR4-202ENST00000409817 FAM173AQ9BQD7 235 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 TRAF4Q9BUZ4 470 aaPredicted RBP6.62□□□□□ -1.35
CXCR4-202ENST00000409817 PBOV1Q9GZY1 135 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 DDX28Q9NUL7 540 aaKnown RBP6.62□□□□□ -1.35
CXCR4-202ENST00000409817 TAS2R8Q9NYW2 309 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 EMC3Q9P0I2 261 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 LRFN1Q9P244 771 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 FBXL3Q9UKT7 428 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 CLEC4AQ9UMR7 237 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 LAMA1P25391 3075 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 A0A1B0GVC2 190 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 A0A1B0GVI7 797 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 A0A1W2PNU3 283 aaPredicted RBP6.62□□□□□ -1.35
CXCR4-202ENST00000409817 A6NIN4 97 aa6.62□□□□□ -1.35
CXCR4-202ENST00000409817 SYT7O43581 403 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms