RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 SF3B4Q15427 424 aaKnown RBP eCLIP10.89□□□□□ -0.67
CHMP3-204ENST00000409727 TSC22D1Q15714 1073 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 RHOUQ7L0Q8 258 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 NR2C2APQ86WQ0 139 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 OR8B12Q8NGG6 310 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 OR1F12Q8NHA8 337 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 WNT5BQ9H1J7 359 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 NIPAL2Q9H841 368 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 ZNF224Q9NZL3 707 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 DHDHQ9UQ10 334 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 TRBV5-5A0A0J9YX44 114 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 C5orf63A6NC05 138 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 MBD3L4A6NDZ8 208 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-204ENST00000409727 MBD3L3A6NE82 208 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-204ENST00000409727 A6NIN4 97 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 MBD3L5A6NJ08 208 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-204ENST00000409727 TTLL8A6PVC2 850 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 RGS5O15539 181 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 TBX1O43435 398 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 SYNGR3O43761 229 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 LMX1BO60663 402 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 RAD51DO75771 328 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 LYZL6O75951 148 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 TMIGD3P0DMS9 266 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-204ENST00000409727 SRMP19623 302 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 DCTDP32321 178 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 LY6DQ14210 128 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 RSPO1Q2MKA7 263 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-204ENST00000409727 SLC36A2Q495M3 483 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 PABPC1L2AQ5JQF8 200 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 UNQ9370/PRO34162Q6UXP9 181 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 BTLAQ7Z6A9 289 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 ELMOD2Q8IZ81 293 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 NAXEQ8NCW5 288 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 OR1K1Q8NGR3 316 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 OR13C3Q8NGS6 347 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 MBD3L2Q8NHZ7 208 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-204ENST00000409727 OR51E1Q8TCB6 317 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 SPTSSAQ969W0 71 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 SLX1AQ9BQ83 275 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 HDHD2Q9H0R4 259 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 PRORYQ9H606 182 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 ZNF319Q9P2F9 582 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 PLEKHB1Q9UF11 243 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-204ENST00000409727 TINAGQ9UJW2 476 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 AK6Q9Y3D8 172 aaKnown RBP10.89□□□□□ -0.67
CHMP3-204ENST00000409727 DOCK7Q96N67 2140 aa10.89□□□□□ -0.67
CHMP3-204ENST00000409727 A0A1W2PR80 420 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 E9PLN8 166 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 M0R135 149 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 CTDSP2O14595 271 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 PRRG2O14669 202 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 TNFSF13O75888 250 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 IL2RAP01589 272 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 MMP7P09237 267 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-204ENST00000409727 ACSM4P0C7M7 580 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 UBCP0CG48 685 aaKnown RBP10.88□□□□□ -0.67
CHMP3-204ENST00000409727 IGHV1-2P23083 117 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 MAPK3P27361 379 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-204ENST00000409727 NRN1LQ496H8 165 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 IDNKQ5T6J7 187 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 ZNF704Q6ZNC4 412 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-204ENST00000409727 ZNF433Q8N7K0 673 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-204ENST00000409727 OR6Q1Q8NGQ2 317 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 OR6K3Q8NGY3 331 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 ZNF799Q96GE5 643 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 PGAM5Q96HS1 289 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 SOX7Q9BT81 388 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 OPN3Q9H1Y3 402 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-204ENST00000409727 MMP27Q9H306 513 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 NOX3Q9HBY0 568 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 TCF7L1Q9HCS4 588 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 HHLA2Q9UM44 414 aa10.88□□□□□ -0.67
CHMP3-204ENST00000409727 TRAV8-7A0A075B6U6 113 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 SYT7O43581 403 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 SLC19A2O60779 497 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 MAS1P04201 325 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 RAB3BP20337 219 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 CCNOP22674 350 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 S100A5P33763 92 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 HGFACQ04756 655 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 KLRB1Q12918 225 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 STK11Q15831 433 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 SLC25A35Q3KQZ1 300 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 ANKRD16Q6P6B7 361 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 DOLPP1Q86YN1 238 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 ZNF610Q8N9Z0 462 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 CPEB3Q8NE35 698 aaKnown RBP10.87□□□□□ -0.67
CHMP3-204ENST00000409727 ASB5Q8WWX0 329 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 STARD4Q96DR4 205 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 FAM71F1Q96KD3 344 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-204ENST00000409727 NXF2Q9GZY0 626 aaKnown RBP10.87□□□□□ -0.67
CHMP3-204ENST00000409727 SMURF1Q9HCE7 757 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 NUFIP1Q9UHK0 495 aaKnown RBP10.87□□□□□ -0.67
CHMP3-204ENST00000409727 DAPK2Q9UIK4 370 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 PROCRQ9UNN8 238 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 MAP1BP46821 2468 aaKnown RBP10.87□□□□□ -0.67
CHMP3-204ENST00000409727 ZZEF1O43149 2961 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 CIB4A0PJX0 185 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 OR6C6A6NF89 314 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms