RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 POU4F3Q15319 338 aa22.68■■□□□ 1.22
SPIRE1-202ENST00000409402 SUMF1Q8NBK3 374 aa22.68■■□□□ 1.22
SPIRE1-202ENST00000409402 GNB3P16520 340 aa22.68■■□□□ 1.22
SPIRE1-202ENST00000409402 SLC38A9Q8NBW4 561 aa22.68■■□□□ 1.22
SPIRE1-202ENST00000409402 FAM213BQ8TBF2 198 aa22.68■■□□□ 1.22
SPIRE1-202ENST00000409402 SLC17A1Q14916 467 aa22.68■■□□□ 1.22
SPIRE1-202ENST00000409402 RNPS1Q15287 305 aaKnown RBP22.68■■□□□ 1.22
SPIRE1-202ENST00000409402 C3orf49Q96BT1 292 aa22.68■■□□□ 1.22
SPIRE1-202ENST00000409402 C20orf85Q9H1P6 137 aa22.68■■□□□ 1.22
SPIRE1-202ENST00000409402 A0A087WUJ7 227 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 GCNT2Q8N0V5 402 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 OR1J1Q8NGS3 322 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 TAS2R5Q9NYW4 299 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 LOXHD1Q8IVV2 1947 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 K7EQM0 130 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 ACER2Q5QJU3 275 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 JMJD6Q6NYC1 403 aaPredicted RBP22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 GPR119Q8TDV5 335 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 FOXB1Q99853 325 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 C5orf67F2Z3F1 127 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 TMEM11P17152 192 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 SLC35E1Q96K37 410 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 MBOAT4Q96T53 435 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 TNFRSF12AQ9NP84 129 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 MC2RQ01718 297 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 ZNF321PQ8N8H1 164 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 ALKBH3Q96Q83 286 aaPredicted RBP22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 SUCNR1Q9BXA5 334 aa22.67■■□□□ 1.22
SPIRE1-202ENST00000409402 AGAP14A8MT82 685 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 FAM109AQ8N4B1 249 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 CPEP16870 476 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 TBPP20226 339 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 PTBP1P26599 531 aaKnown RBP eCLIP22.66■■□□□ 1.226e-7■■■■■ 28.9
SPIRE1-202ENST00000409402 HAAOP46952 286 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 ISL1P61371 349 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 LIMS2Q7Z4I7 341 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 PTOV1Q86YD1 416 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 FBXO17Q96EF6 278 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 UGT2A1Q9Y4X1 527 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 TFAP2AP05549 437 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 RFX2P48378 723 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 OR51A4Q8NGJ6 313 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 C17orf50Q8WW18 174 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 ZDHHC16Q969W1 377 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 SIGLEC11Q96RL6 698 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 POFUT1Q9H488 388 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 OR2I1PQ8NGU4 316 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 APOBEC3DQ96AK3 386 aaPredicted RBP22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 DFFBO76075 338 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 SMIM21Q3B7S5 101 aa22.66■■□□□ 1.22
SPIRE1-202ENST00000409402 IMPA2O14732 288 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 AGERQ15109 404 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 FN3KRPQ9HA64 309 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 K7EQS6 105 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 TERTO14746 1132 aaKnown RBP22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 SNRNP70P08621 437 aaKnown RBP22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 JUNBP17275 347 aaPredicted RBP22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 GABRA4P48169 554 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 CCR6P51684 374 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 SRSF5Q13243 272 aaKnown RBP22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 TMEM211Q6ICI0 200 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 GABRG1Q8N1C3 465 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 B9D1Q9UPM9 204 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 PPP1R3CQ9UQK1 317 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 TOX3O15405 576 aaPredicted RBP22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 MRPS24Q96EL2 167 aaKnown RBP22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 ALG14Q96F25 216 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 TECTBQ96PL2 329 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 COPS3Q9UNS2 423 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 TMEM200CA6NKL6 621 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 SNAPINO95295 136 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 RELAQ04206 551 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 CDC20BQ86Y33 519 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 PLK3Q9H4B4 646 aa22.65■■□□□ 1.22
SPIRE1-202ENST00000409402 ZNF816-ZNF321PA0A0X1KG74 233 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 TNFRSF1AP19438 455 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 GSG1Q2KHT4 349 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 IL34Q6ZMJ4 242 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 SLC25A46Q96AG3 418 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 CHST2Q9Y4C5 530 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 CRYM-AS1A6NIL9 109 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 I6L893 689 aaPredicted RBP22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 DRD3P35462 400 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 AQP6Q13520 282 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 FAM74A1Q5RGS3 127 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 OR10G3Q8NGC4 313 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 CA5BP1Q8WTZ4 195 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 CORO2AQ92828 525 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 IKZF5Q9H5V7 419 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 BIN3Q9NQY0 253 aa22.64■■□□□ 1.22
SPIRE1-202ENST00000409402 CTSVO60911 334 aa22.64■■□□□ 1.21
SPIRE1-202ENST00000409402 HLA-DOBP13765 273 aa22.64■■□□□ 1.21
SPIRE1-202ENST00000409402 SOWAHCQ53LP3 525 aaPredicted RBP22.64■■□□□ 1.21
SPIRE1-202ENST00000409402 OR8G2PQ6IF36 304 aa22.64■■□□□ 1.21
SPIRE1-202ENST00000409402 TMEM200AQ86VY9 491 aa22.64■■□□□ 1.21
SPIRE1-202ENST00000409402 OR51S1Q8NGJ8 323 aa22.64■■□□□ 1.21
SPIRE1-202ENST00000409402 EXOSC3Q9NQT5 275 aaKnown RBP22.64■■□□□ 1.21
SPIRE1-202ENST00000409402 SLC23A1Q9UHI7 598 aa22.64■■□□□ 1.21
SPIRE1-202ENST00000409402 ZNF121P58317 390 aaPredicted RBP22.64■■□□□ 1.21
SPIRE1-202ENST00000409402 HABP2Q14520 560 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms