RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 REEP1Q9H902 201 aa10.89□□□□□ -0.67
SNORD88B-201ENST00000408454 PATZ1Q9HBE1 687 aaKnown RBP10.89□□□□□ -0.67
SNORD88B-201ENST00000408454 G6PC2Q9NQR9 355 aa10.89□□□□□ -0.67
SNORD88B-201ENST00000408454 POLR3KQ9Y2Y1 108 aaPredicted RBP10.89□□□□□ -0.67
SNORD88B-201ENST00000408454 CDH10Q9Y6N8 788 aa10.89□□□□□ -0.67
SNORD88B-201ENST00000408454 TRBV4-1A0A0J9YWV2 114 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 RIIAD1A6NNX1 92 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 A8MXK9 166 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 TNFRSF11BO00300 401 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 GMDSO60547 372 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 DEAF1O75398 565 aaPredicted RBP10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 PPP1R3DO95685 299 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 IGHV2-70P01814 119 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 RPS2P15880 293 aaKnown RBP10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 ZNF3P17036 446 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 FMO3P31513 532 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 GRK5P34947 590 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 FHL1Q13642 323 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 CD276Q5ZPR3 534 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 DRAM2Q6UX65 266 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 ZNF620Q6ZNG0 422 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 ZBTB46Q86UZ6 589 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 C3orf56Q8N813 242 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 SLC26A10Q8NG04 563 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 TOR3AQ9H497 397 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 SRA1Q9HD15 236 aaKnown RBP10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 ABCB9Q9NP78 766 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 RPRD1BQ9NQG5 326 aaKnown RBP10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 C14orf119Q9NWQ9 140 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 PRPF19Q9UMS4 504 aaKnown RBP10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 B9D1Q9UPM9 204 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 AUP1Q9Y679 476 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 RTTNQ86VV8 2226 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 COL6A5A8TX70 2615 aa10.88□□□□□ -0.67
SNORD88B-201ENST00000408454 YLPM1P49750 1951 aaKnown RBP10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 RER1O15258 196 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 XRCC2O43543 280 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 CCNB2O95067 398 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 LCATP04180 440 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 LIPFP07098 398 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 GGT2P36268 569 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 SLC6A9P48067 706 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 GSSP48637 474 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 HMGA2P52926 109 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 GNB2P62879 340 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 GRB2P62993 217 aaKnown RBP10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 GNGT1P63211 74 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 HIST1H3AP68431 136 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 HIST2H3PS2Q5TEC6 136 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 HIST2H3AQ71DI3 136 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 RHOUQ7L0Q8 258 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 DHFR2Q86XF0 187 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 DEFB107AQ8IZN7 70 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 RNF148Q8N7C7 305 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 OR2T33Q8NG76 320 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 OR4K13Q8NH42 304 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 SGMS2Q8NHU3 365 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 NEIL1Q96FI4 390 aaPredicted RBP10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 NMNAT3Q96T66 252 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 SLC30A2Q9BRI3 323 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 SSBP3Q9BWW4 388 aaPredicted RBP10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 C1QTNF5Q9BXJ0 243 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 FN3KRPQ9HA64 309 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 ZNF556Q9HAH1 456 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 TBC1D23Q9NUY8 699 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 PTTG3PQ9NZH4 202 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 NUP50Q9UKX7 468 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 STARD10Q9Y365 291 aa10.87□□□□□ -0.67
SNORD88B-201ENST00000408454 IGLV1-36A0A0B4J1U3 117 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 F5H5K5 113 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 TMEM178BH3BS89 294 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 M0R135 149 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 PHYHO14832 338 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 HIST1H1CP16403 213 aaKnown RBP10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 CALB2P22676 271 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 CDKN2AP42771 156 aaKnown RBP10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 GATA4P43694 442 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 LCN2P80188 198 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 TRAP1Q12931 704 aaKnown RBP10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 FOXL1Q12952 345 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 CCDC92Q53HC0 331 aaPredicted RBP10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 DCDC5Q6ZRR9 648 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 RASSF6Q6ZTQ3 369 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 OR52E2Q8NGJ4 325 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 TEX47Q8TBZ9 253 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 ITLN1Q8WWA0 313 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 ZNF799Q96GE5 643 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 MEGF10Q96KG7 1140 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 PRRG3Q9BZD7 231 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 GCM1Q9NP62 436 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 IL20Q9NYY1 176 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 CYB5R1Q9UHQ9 305 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 ZNF391Q9UJN7 358 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 PPIAL4AQ9Y536 164 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 V9GYQ6 96 aa10.86□□□□□ -0.67
SNORD88B-201ENST00000408454 GGT3PA6NGU5 568 aa10.85□□□□□ -0.67
SNORD88B-201ENST00000408454 ZNF878C9JN71 531 aa10.85□□□□□ -0.67
SNORD88B-201ENST00000408454 GNGT2O14610 69 aa10.85□□□□□ -0.67
SNORD88B-201ENST00000408454 TIPRLO75663 272 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms