RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 OR10AD1Q8NGE0 317 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 OR8D4Q8NGM9 314 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 ZNRF4Q8WWF5 429 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 DDOQ99489 341 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 PITX2Q99697 317 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 TRIM15Q9C019 465 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 PNRC2Q9NPJ4 139 aaKnown RBP16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 VNN3Q9NY84 501 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 PPP1R3CQ9UQK1 317 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 F5H5K5 113 aa16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 DYNC1I1O14576 645 aa16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 RGS9O75916 674 aaPredicted RBP16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 ZFP36P26651 326 aaKnown RBP16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 PYCR1P32322 319 aa16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 ZNF362Q5T0B9 420 aaPredicted RBP16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 COLCA1Q6ZS62 124 aa16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 NAA40Q86UY6 237 aa16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 BHLHE23Q8NDY6 225 aa16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 OR8G5Q8NG78 346 aa16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 OR52L1Q8NGH7 329 aa16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 SIGLEC11Q96RL6 698 aa16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 CDADC1Q9BWV3 514 aa16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 IL20Q9NYY1 176 aa16.26■□□□□ 0.19
SMARCB1-204ENST00000407422 H0YL77 283 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 VENTXO95231 258 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 ACSM4P0C7M7 580 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 T-ENOLP0DO92 83 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 ADRA2CP18825 462 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 RPS27P42677 84 aaKnown RBP16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 ZMYND11Q15326 602 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 SLC36A3Q495N2 470 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 DCAF12L2Q5VW00 463 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 LCN8Q6JVE9 175 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 LYPD4Q6UWN0 246 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 AQP11Q8NBQ7 271 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 OR2AJ1Q8NGZ0 328 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 MAP6Q96JE9 813 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 ATF6BQ99941 703 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 C1QTNF5Q9BXJ0 243 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 GCM1Q9NP62 436 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 U3KQV3 271 aa16.25■□□□□ 0.19
SMARCB1-204ENST00000407422 IGHV3-64DA0A0J9YX35 117 aa16.24■□□□□ 0.19
SMARCB1-204ENST00000407422 SURF4O15260 269 aa16.24■□□□□ 0.19
SMARCB1-204ENST00000407422 CCNB2O95067 398 aa16.24■□□□□ 0.19
SMARCB1-204ENST00000407422 TRIM25Q14258 630 aaKnown RBP16.24■□□□□ 0.19
SMARCB1-204ENST00000407422 RPL13AP3Q6NVV1 102 aa16.24■□□□□ 0.19
SMARCB1-204ENST00000407422 DHFR2Q86XF0 187 aa16.24■□□□□ 0.19
SMARCB1-204ENST00000407422 OR51L1Q8NGJ5 315 aa16.24■□□□□ 0.19
SMARCB1-204ENST00000407422 ZNF582Q96NG8 517 aaPredicted RBP16.24■□□□□ 0.19
SMARCB1-204ENST00000407422 TVP23AA6NH52 213 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 MLNRO43193 412 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 PSKH1P11801 424 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 MMP16P51512 607 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 SEC61A1P61619 476 aaKnown RBP16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 BTG1P62324 171 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 TRAP1Q12931 704 aaKnown RBP16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 RASSF6Q6ZTQ3 369 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 LRRC28Q86X40 367 aaPredicted RBP16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 ARHGAP24Q8N264 748 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 LINC00471Q8N535 108 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 PROKR2Q8NFJ6 384 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 OR10S1Q8NGN2 331 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 OR13G1Q8NGZ3 307 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 ZNF420Q8TAQ5 688 aaPredicted RBP16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 ST7LQ8TDW4 575 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 MEGF10Q96KG7 1140 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 SLC30A2Q9BRI3 323 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 MAGIXQ9H6Y5 334 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 PCDHB10Q9UN67 800 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 DOCK11Q5JSL3 2073 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 IQCF6A8MYZ5 107 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 FAM107AO95990 144 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 EPHA1P21709 976 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 ECH1Q13011 328 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 GK2Q14410 553 aaPredicted RBP16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 SLC37A3Q8NCC5 494 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 CCDC197Q8NCU1 140 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 OR9Q1Q8NGQ5 310 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 CLPTM1LQ96KA5 538 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 MUC13Q9H3R2 512 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 C7orf69Q9H7B7 122 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 MMP26Q9NRE1 261 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 TBC1D23Q9NUY8 699 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 OPN4Q9UHM6 478 aa16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 SAMHD1Q9Y3Z3 626 aaKnown RBP16.23■□□□□ 0.19
SMARCB1-204ENST00000407422 F5H5P2 479 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 TMEM178BH3BS89 294 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 J3QLI3 93 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 ZNF205O95201 554 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 SOX14O95416 240 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 LCATP04180 440 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 HLA-DPB1P04440 258 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 ZNF823P16415 610 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 SELEP16581 610 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 CALB2P22676 271 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 ANOS1P23352 680 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 TMEM155Q4W5P6 130 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 OR2T5Q6IEZ7 315 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 SLC27A4Q6P1M0 643 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 C1QL2Q7Z5L3 287 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms