RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 BEX1Q9HBH7 125 aa3.41□□□□□ -1.86
PTPN12-202ENST00000407343 CLN8Q9UBY8 286 aa3.41□□□□□ -1.86
PTPN12-202ENST00000407343 AHDC1Q5TGY3 1603 aaPredicted RBP3.41□□□□□ -1.86
PTPN12-202ENST00000407343 A0A0J9YXV3 536 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 SERTM2A0A1B0GWG4 89 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 A6NDN8 102 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 TEX46H3BTG2 121 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 NVLO15381 856 aaKnown RBP3.4□□□□□ -1.87
PTPN12-202ENST00000407343 CACNG3O60359 315 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 RDH16O75452 317 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 CCNE2O96020 404 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 OPRK1P41145 380 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 SLC11A1P49279 550 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 GFERP55789 205 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 SNRNP35Q16560 246 aaKnown RBP3.4□□□□□ -1.87
PTPN12-202ENST00000407343 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 TMEM53Q6P2H8 277 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 SPESP1Q6UW49 350 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 BHLHA15Q7RTS1 189 aaPredicted RBP3.4□□□□□ -1.87
PTPN12-202ENST00000407343 WDFY1Q8IWB7 410 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 TTC29Q8NA56 475 aaPredicted RBP3.4□□□□□ -1.87
PTPN12-202ENST00000407343 NRBF2Q96F24 287 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 C11orf70Q9BRQ4 267 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 EXO5Q9H790 373 aa3.4□□□□□ -1.87
PTPN12-202ENST00000407343 COL27A1Q8IZC6 1860 aaPredicted RBP3.39□□□□□ -1.87
PTPN12-202ENST00000407343 A0A1W2PQ67 120 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 OR6C74A6NCV1 312 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 HLA-DQA1P01909 254 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 OR56A5P0C7T3 313 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 RAB4AP20338 218 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 NBL1P41271 181 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 CXCL12P48061 93 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 VSX2P58304 361 aaPredicted RBP3.39□□□□□ -1.87
PTPN12-202ENST00000407343 RPS23P62266 143 aaKnown RBP3.39□□□□□ -1.87
PTPN12-202ENST00000407343 IGFL1Q6UW32 110 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 C12orf54Q6X4T0 127 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 OSR2Q8N2R0 312 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 ARRDC1Q8N5I2 433 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 OR10C1Q96KK4 312 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 ZYG11BQ9C0D3 744 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 AUNIPQ9H7T9 357 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 SLC38A10Q9HBR0 1119 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 CLN6Q9NWW5 311 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 SLC17A7Q9P2U7 560 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 RCL1Q9Y2P8 373 aaKnown RBP3.39□□□□□ -1.87
PTPN12-202ENST00000407343 UBN2Q6ZU65 1347 aa3.39□□□□□ -1.87
PTPN12-202ENST00000407343 C5orf63A6NC05 138 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 PLPP1O14494 284 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 FGF4P08620 206 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 OR8G3PP0DMU2 310 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 GALP22466 123 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 LOXP28300 417 aaPredicted RBP3.38□□□□□ -1.87
PTPN12-202ENST00000407343 CDKN2DP55273 166 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 IRF8Q02556 426 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 ZNF816Q0VGE8 651 aaPredicted RBP3.38□□□□□ -1.87
PTPN12-202ENST00000407343 HMGN2P46Q86SG4 172 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 FAM71AQ8IYT1 594 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 OR11H7Q8NGC8 314 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 LINC01560Q8TB33 94 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 DCPSQ96C86 337 aaKnown RBP3.38□□□□□ -1.87
PTPN12-202ENST00000407343 L3HYPDHQ96EM0 354 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 TEKT3Q9BXF9 490 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 FGF23Q9GZV9 251 aaPredicted RBP3.38□□□□□ -1.87
PTPN12-202ENST00000407343 VPS37BQ9H9H4 285 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 MRPS30Q9NP92 439 aaKnown RBP3.38□□□□□ -1.87
PTPN12-202ENST00000407343 C20orf96Q9NUD7 363 aaPredicted RBP3.38□□□□□ -1.87
PTPN12-202ENST00000407343 TRMT112Q9UI30 125 aaKnown RBP3.38□□□□□ -1.87
PTPN12-202ENST00000407343 TSPOAP1O95153 1857 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 PCDH11XQ9BZA7 1347 aa3.38□□□□□ -1.87
PTPN12-202ENST00000407343 FHOD3Q2V2M9 1422 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 YEATS2Q9ULM3 1422 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 DNAJB6O75190 326 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 CCNB2O95067 398 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 HBE1P02100 147 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 CD74P04233 296 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 CLTAP09496 248 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 C1GALT1C1LP0DN25 315 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 CELP19835 753 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 BMI1P35226 326 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 RPS5P46782 204 aaKnown RBP3.37□□□□□ -1.87
PTPN12-202ENST00000407343 ZNF121P58317 390 aaPredicted RBP3.37□□□□□ -1.87
PTPN12-202ENST00000407343 CDK5Q00535 292 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 COX19Q49B96 90 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 RNASE13Q5GAN3 156 aaKnown RBP3.37□□□□□ -1.87
PTPN12-202ENST00000407343 TPTE2P1Q5T6R2 138 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 EIF3MQ7L2H7 374 aaKnown RBP3.37□□□□□ -1.87
PTPN12-202ENST00000407343 SSX9Q7RTT3 188 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 MRPL55Q7Z7F7 128 aaKnown RBP3.37□□□□□ -1.87
PTPN12-202ENST00000407343 OR51E1Q8TCB6 317 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 C8orf17Q9NRJ1 99 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 MARCOQ9UEW3 520 aaPredicted RBP3.37□□□□□ -1.87
PTPN12-202ENST00000407343 TBC1D24Q9ULP9 559 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 COMMD3-BMI1R4GMX3 469 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 BRWD3Q6RI45 1802 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 ANKRD12Q6UB98 2062 aa3.37□□□□□ -1.87
PTPN12-202ENST00000407343 C7orf66A4D0T2 115 aa3.36□□□□□ -1.87
PTPN12-202ENST00000407343 KRBOX1C9JBD0 128 aa3.36□□□□□ -1.87
PTPN12-202ENST00000407343 GABRPO00591 440 aa3.36□□□□□ -1.87
PTPN12-202ENST00000407343 NMT2O60551 498 aa3.36□□□□□ -1.87
PTPN12-202ENST00000407343 SEMA3DO95025 777 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms