RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 VRK1Q99986 396 aaPredicted RBP16.47■□□□□ 0.23
EWSR1-207ENST00000406548 LMO7DNF2Z398 122 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 IL2RAP01589 272 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 HSD11B1P28845 292 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 LUMP51884 338 aaPredicted RBP16.46■□□□□ 0.23
EWSR1-207ENST00000406548 PPP1R1AQ13522 171 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 TAF13Q15543 124 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 H1FNTQ75WM6 255 aaPredicted RBP16.46■□□□□ 0.23
EWSR1-207ENST00000406548 SYT13Q7L8C5 426 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 PAQR4Q8N4S7 273 aaPredicted RBP16.46■□□□□ 0.23
EWSR1-207ENST00000406548 ZDHHC22Q8N966 263 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 CHST4Q8NCG5 386 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 MFSD8Q8NHS3 518 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 ST8SIA1Q92185 356 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 CST11Q9H112 138 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 FAM206AQ9NX38 181 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 MED29Q9NX70 200 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 ARID1BQ8NFD5 2236 aaPredicted RBP16.46■□□□□ 0.23
EWSR1-207ENST00000406548 CEP290O15078 2479 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 LOC100509620A0A075B734 347 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 ANKUB1A6NFN9 424 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 NPIPB13A6NJU9 1138 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 NPIPB4C9JG80 1138 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 FOLR1P15328 257 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 DLSTP36957 453 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 HSF1Q00613 529 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 GVQW1Q8N7I0 195 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 OR52N4Q8NGI2 321 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 PPP1R1CQ8WVI7 109 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 NUDCD2Q8WVJ2 157 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 SEC22AQ96IW7 307 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 DNTTIP1Q9H147 329 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 BARX1Q9HBU1 254 aaPredicted RBP16.46■□□□□ 0.23
EWSR1-207ENST00000406548 FER1L5A0AVI2 2057 aa16.46■□□□□ 0.23
EWSR1-207ENST00000406548 A0A1B0GX78 115 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 RNF222A6NCQ9 220 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 ZNF217O75362 1048 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 BPNT1O95861 308 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 TTRP02766 147 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 HLA-GP17693 338 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 GNALP38405 381 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 STARP49675 285 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 ATP1B3P54709 279 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 OR52W1Q6IF63 320 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 MOB3CQ70IA8 216 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 D2HGDHQ8N465 521 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 OR1M1Q8NGA1 313 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 OR52H1Q8NGJ2 320 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 MITD1Q8WV92 249 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 BRWD1Q9NSI6 2320 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 C9orf170A2RU37 121 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 C2orf72A6NCS6 295 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 STK17BO94768 372 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 DCNP07585 359 aaKnown RBP16.45■□□□□ 0.22
EWSR1-207ENST00000406548 RNF4P78317 190 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 QRFPP83859 136 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 TLE3Q04726 772 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 SLC22A6Q4U2R8 563 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 C16orf47Q6ZP98 133 aaPredicted RBP16.45■□□□□ 0.22
EWSR1-207ENST00000406548 CFAP77Q6ZQR2 320 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 SLC22A24Q8N4F4 322 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 SLAMF6Q96DU3 332 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 ADAT3Q96EY9 351 aaPredicted RBP16.45■□□□□ 0.22
EWSR1-207ENST00000406548 ZNF75AQ96N20 296 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 CHST11Q9NPF2 352 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 CTSFQ9UBX1 484 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 PLEKHA6Q9Y2H5 1048 aa16.45■□□□□ 0.22
EWSR1-207ENST00000406548 EXPH5Q8NEV8 1989 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 IGHV1OR21-1A0A087WYE8 117 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 SYT7O43581 403 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 APOC3P02656 99 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 VSIG8P0DPA2 414 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 CD96P40200 585 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 EIF1AXP47813 144 aaKnown RBP16.44■□□□□ 0.22
EWSR1-207ENST00000406548 HNRNPKP61978 463 aaKnown RBP eCLIP16.44■□□□□ 0.228e-8■■□□□ 12.4
EWSR1-207ENST00000406548 ATXN7L3Q14CW9 347 aaPredicted RBP16.44■□□□□ 0.22
EWSR1-207ENST00000406548 FAM122CQ6P4D5 195 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 KLHL24Q6TFL4 600 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 ACOT7LQ6ZUV0 252 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 CARFQ8N187 725 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 OR10H5Q8NGA6 315 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 C11orf40Q8WZ69 217 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 PHYHIPLQ96FC7 376 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 C5orf34Q96MH7 638 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 PHB2Q99623 299 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 UQCC2Q9BRT2 126 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 ZNF471Q9BX82 626 aaPredicted RBP16.44■□□□□ 0.22
EWSR1-207ENST00000406548 PTGES2Q9H7Z7 377 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 IFT46Q9NQC8 304 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 ZC4H2Q9NQZ6 224 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 SUSD2Q9UGT4 822 aa16.44■□□□□ 0.22
EWSR1-207ENST00000406548 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.43■□□□□ 0.22
EWSR1-207ENST00000406548 IGHV3-20A0A0C4DH32 117 aa16.43■□□□□ 0.22
EWSR1-207ENST00000406548 HRH1P35367 487 aa16.43■□□□□ 0.22
EWSR1-207ENST00000406548 APOBEC1P41238 236 aaKnown RBP16.43■□□□□ 0.22
EWSR1-207ENST00000406548 FBXW4P57775 412 aa16.43■□□□□ 0.22
EWSR1-207ENST00000406548 IL13RA1P78552 427 aa16.43■□□□□ 0.22
EWSR1-207ENST00000406548 CFHR1Q03591 330 aa16.43■□□□□ 0.22
EWSR1-207ENST00000406548 BEX5Q5H9J7 111 aa16.43■□□□□ 0.22
EWSR1-207ENST00000406548 SHISA6Q6ZSJ9 500 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms