RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 TCRBV5S2A0A599 114 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 BHLHE40O14503 412 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 MLNRO43193 412 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 KRT36O76013 467 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 FSHBP01225 129 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 ACSM4P0C7M7 580 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 ZFP36P26651 326 aaKnown RBP12.94□□□□□ -0.34
TPM1-207ENST00000403994 GGT2P36268 569 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 TRAP1Q12931 704 aaKnown RBP12.94□□□□□ -0.34
TPM1-207ENST00000403994 RSPO1Q2MKA7 263 aaPredicted RBP12.94□□□□□ -0.34
TPM1-207ENST00000403994 SLC36A3Q495N2 470 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 TMEM155Q4W5P6 130 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 SLC35F1Q5T1Q4 408 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 ZNF770Q6IQ21 691 aaPredicted RBP12.94□□□□□ -0.34
TPM1-207ENST00000403994 RPL13AP3Q6NVV1 102 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 COLCA1Q6ZS62 124 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 BHLHE23Q8NDY6 225 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 OR8G5Q8NG78 346 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 OR52E2Q8NGJ4 325 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 OR4C15Q8NGM1 316 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 OR8D4Q8NGM9 314 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 ZNF418Q8TF45 676 aaPredicted RBP12.94□□□□□ -0.34
TPM1-207ENST00000403994 MEGF10Q96KG7 1140 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 PITX2Q99697 317 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 C1QTNF5Q9BXJ0 243 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 WDR76Q9H967 626 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 GCM1Q9NP62 436 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 OPN4Q9UHM6 478 aa12.94□□□□□ -0.34
TPM1-207ENST00000403994 IQCF6A8MYZ5 107 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 F5H0A9 414 aaPredicted RBP12.93□□□□□ -0.34
TPM1-207ENST00000403994 TNFRSF11BO00300 401 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 HLA-DQA2P01906 255 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 SBK2P0C263 348 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 PSKH1P11801 424 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 MNAT1P51948 309 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 HMGA2P52926 109 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 PRSS12P56730 875 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 HILS1P60008 231 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 SEC61A1P61619 476 aaKnown RBP12.93□□□□□ -0.34
TPM1-207ENST00000403994 ECH1Q13011 328 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 LCN8Q6JVE9 175 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 KLHL36Q8N4N3 616 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 FITM2Q8N6M3 262 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 CYB561A3Q8NBI2 242 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 OR2AJ1Q8NGZ0 328 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 ZFAND2BQ8WV99 257 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 ZNF582Q96NG8 517 aaPredicted RBP12.93□□□□□ -0.34
TPM1-207ENST00000403994 SLC30A2Q9BRI3 323 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 TRIM15Q9C019 465 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 VNN3Q9NY84 501 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 KCNG2Q9UJ96 466 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 PCDHB10Q9UN67 800 aa12.93□□□□□ -0.34
TPM1-207ENST00000403994 PPIAL4EA0A075B759 164 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 PPIAL4CA0A0B4J2A2 164 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 A0A1B0GWJ7 208 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 A8MXK9 166 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 PPIAL4DF5H284 164 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 F5H5K5 113 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 H0YL77 283 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 TMEM178BH3BS89 294 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 FOXH1O75593 365 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 PPIAL4FP0DN26 164 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 PYCR1P32322 319 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 MDH2P40926 338 aaKnown RBP12.92□□□□□ -0.34
TPM1-207ENST00000403994 RPS27P42677 84 aaKnown RBP12.92□□□□□ -0.34
TPM1-207ENST00000403994 GK2Q14410 553 aaPredicted RBP12.92□□□□□ -0.34
TPM1-207ENST00000403994 SLC27A4Q6P1M0 643 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 LYPD4Q6UWN0 246 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 USP43Q70EL4 1123 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 LRRC28Q86X40 367 aaPredicted RBP12.92□□□□□ -0.34
TPM1-207ENST00000403994 LINC00471Q8N535 108 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 ATG16L2Q8NAA4 619 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 DEFB108BQ8NET1 73 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 PROKR2Q8NFJ6 384 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 OR10S1Q8NGN2 331 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 OR13G1Q8NGZ3 307 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 MAP6Q96JE9 813 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 SLC6A7Q99884 636 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 MUC13Q9H3R2 512 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 MAGIXQ9H6Y5 334 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 C7orf69Q9H7B7 122 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 PATZ1Q9HBE1 687 aaKnown RBP12.92□□□□□ -0.34
TPM1-207ENST00000403994 TBC1D23Q9NUY8 699 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 COMMD3-BMI1R4GMX3 469 aa12.92□□□□□ -0.34
TPM1-207ENST00000403994 IGHV3-64DA0A0J9YX35 117 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 CEACAM18A8MTB9 384 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 B2RBV5 119 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 F5H5P2 479 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 IFNL4K9M1U5 179 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 HAX1O00165 279 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 CCNB2O95067 398 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 SRP9P49458 86 aaKnown RBP12.91□□□□□ -0.34
TPM1-207ENST00000403994 PPP1R8Q12972 351 aaKnown RBP12.91□□□□□ -0.34
TPM1-207ENST00000403994 RASSF6Q6ZTQ3 369 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 ARHGAP24Q8N264 748 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 MUC20Q8N307 709 aaPredicted RBP12.91□□□□□ -0.34
TPM1-207ENST00000403994 AQP11Q8NBQ7 271 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 SLC37A3Q8NCC5 494 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 OR9Q1Q8NGQ5 310 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 ZNF420Q8TAQ5 688 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms