RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 WDR76Q9H967 626 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 ELOVL3Q9HB03 270 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 DECR2Q9NUI1 292 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 TBC1D23Q9NUY8 699 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 ARMC1Q9NVT9 282 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 MRPL22Q9NWU5 206 aaKnown RBP4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 DCAF16Q9NXF7 216 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 PTTG3PQ9NZH4 202 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 GPR160Q9UJ42 338 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 KCNS2Q9ULS6 477 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 PRPF19Q9UMS4 504 aaKnown RBP4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 SAMHD1Q9Y3Z3 626 aaKnown RBP4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 CUBNO60494 3623 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 DYSFO75923 2080 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 IGHV3-64DA0A0J9YX35 117 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 PLSCR5A0PG75 271 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 BHLHE40O14503 412 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 GYG2O15488 501 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 IDH3BO43837 385 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 ICMTO60725 284 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 CST1P01037 141 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 MT-ND5P03915 603 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 GYPBP06028 91 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 RAP2AP10114 183 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 CLUP10909 449 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 GSTM3P21266 225 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 ANOS1P23352 680 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 GGT2P36268 569 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 CRYBB2P43320 205 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 ARHGDIAP52565 204 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 GP2P55259 537 aaKnown RBP4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 CDH15P55291 814 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 TMEM33P57088 247 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 LMO4P61968 165 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 MRPS11P82912 194 aaKnown RBP4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 COX10Q12887 443 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 CRMP1Q14194 572 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 MOGQ16653 247 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 MICAQ29983 383 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 RSPO1Q2MKA7 263 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 CR1LQ2VPA4 569 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 PCGF3Q3KNV8 242 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAM120AOSQ5T036 256 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF362Q5T0B9 420 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR2T2Q6IF00 324 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC18B1Q6NT16 456 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 PGM2L1Q6PCE3 622 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 ARL9Q6T311 187 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 RASSF6Q6ZTQ3 369 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 NAA40Q86UY6 237 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZBTB46Q86UZ6 589 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 HS3ST5Q8IZT8 346 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR5AS1Q8N127 324 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 LINC01356Q8N9X3 169 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC37A3Q8NCC5 494 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 PROKR2Q8NFJ6 384 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR10G2Q8NGC3 310 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 CCL17Q92583 94 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC7A6OSQ96CW6 309 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 MAP6Q96JE9 813 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 DDOQ99489 341 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 PITX2Q99697 317 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 NIPSNAP1Q9BPW8 284 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 WACQ9BTA9 647 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 CHID1Q9BWS9 393 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 SHARPINQ9H0F6 387 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 C1orf21Q9H246 121 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 MED20Q9H944 212 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 SAP30LQ9HAJ7 183 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 TBCCD1Q9NVR7 557 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 NKIRAS2Q9NYR9 191 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 IL20Q9NYY1 176 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 KLHL21Q9UJP4 597 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 PURGQ9UJV8 347 aaKnown RBP4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 CDC42EP3Q9UKI2 254 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 WIPI2Q9Y4P8 454 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 TANC2Q9HCD6 1990 aa4.89□□□□□ -1.63
HMGB1P20-201ENST00000402555 DHRS12A0PJE2 317 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 ISPDA4D126 451 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 C5orf63A6NC05 138 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAM183AA6NL82 134 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 AQP12BA6NM10 295 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 F5H5K5 113 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 H0YL77 283 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 H3BSA7 217 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 GNGT2O14610 69 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAM157CP0CG43 387 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 KITLGP21583 273 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 PRKACGP22612 351 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 POU1F1P28069 291 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 TNFAIP6P98066 277 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 TRAP1Q12931 704 aaKnown RBP4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 CDK5R2Q13319 367 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 FLOT2Q14254 428 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 HFEQ30201 348 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC36A3Q495N2 470 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 DNAL1Q4LDG9 190 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAM209AQ5JX71 171 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 RPL13AP3Q6NVV1 102 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 UNQ6126/PRO20091Q6UXV3 157 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms