RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 KIAA1958Q8N8K9 716 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 RDH5Q92781 318 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 REEP6Q96HR9 211 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 PTDSS2Q9BVG9 487 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 MFRPQ9BY79 579 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 HSPB2A8KAH6 182 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 DHHO43323 396 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 AADACP22760 399 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 ABCD3P28288 659 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 HSPB2Q16082 182 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 GUSBP11Q6P575 273 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 OR2A5Q96R48 311 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 EXOSC3Q9NQT5 275 aaKnown RBP16.45■□□□□ 0.22
COL18A1-204ENST00000400337 A0A087WZY1 265 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 SHISA8B8ZZ34 492 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 IL2RAP01589 272 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 GNB3P16520 340 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 OPRM1P35372 400 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 AGFG1P52594 562 aaKnown RBP16.45■□□□□ 0.22
COL18A1-204ENST00000400337 C12orf73Q69YU5 71 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 SARAFQ96BY9 339 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 IL20Q9NYY1 176 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 RPH3ALQ9UNE2 315 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 FAM221AA4D161 298 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 HBE1P02100 147 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 SUMO3P55854 103 aaPredicted RBP16.45■□□□□ 0.22
COL18A1-204ENST00000400337 TAF9Q16594 264 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 ZNF468Q5VIY5 522 aaPredicted RBP16.45■□□□□ 0.22
COL18A1-204ENST00000400337 TMUB2Q71RG4 321 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 SLC38A9Q8NBW4 561 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 SMCHD1A6NHR9 2005 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 A0A0B4J2E0 115 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 A0A1B0GX12 115 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 TBX19O60806 448 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 SELEP16581 610 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 NDUFB7P17568 137 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 RAB11AP62491 216 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 DMRTC1Q5HYR2 192 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 ANKRD16Q6P6B7 361 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 ZG16BQ96DA0 208 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 PPP1R14DQ9NXH3 145 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 PRRG2O14669 202 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 PCBP4P57723 403 aaKnown RBP16.44■□□□□ 0.22
COL18A1-204ENST00000400337 DEFB109BQ30KR1 87 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 DAZAP1Q96EP5 407 aaKnown RBP16.44■□□□□ 0.22
COL18A1-204ENST00000400337 WDR34Q96EX3 536 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 VN1R1Q9GZP7 353 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 PCED1AQ9H1Q7 454 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 FER1L6Q2WGJ9 1857 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 OR6C65A6NJZ3 312 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 GPR32P1Q8NGA4 272 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 OR10R2Q8NGX6 335 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 hCG_1809904A0A1W2PP81 198 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 A0A1W2PPE2 198 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 A0A1W2PR64 198 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 A0A1W2PRV1 198 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 TXNL1O43396 289 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 FAM157BP0CG42 384 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 TRAPPC2P0DI81 140 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 TRAPPC2BP0DI82 140 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 CDAP32320 146 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 RAD52P43351 418 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 FAM199XQ6PEV8 388 aaPredicted RBP16.44■□□□□ 0.22
COL18A1-204ENST00000400337 RBMS3Q6XE24 437 aaKnown RBP16.44■□□□□ 0.22
COL18A1-204ENST00000400337 LHFPL2Q6ZUX7 228 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 OR1L3Q8NH93 324 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 DERL3Q96Q80 235 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 POLDIP2Q9Y2S7 368 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 FOLR1P15328 257 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 RFX2P48378 723 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 ZNF121P58317 390 aaPredicted RBP16.44■□□□□ 0.22
COL18A1-204ENST00000400337 UBE2MP61081 183 aaKnown RBP16.44■□□□□ 0.22
COL18A1-204ENST00000400337 SLC25A35Q3KQZ1 300 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 C1orf53Q5VUE5 145 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 GPBAR1Q8TDU6 330 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 FLVCR2Q9UPI3 526 aa16.44■□□□□ 0.22
COL18A1-204ENST00000400337 HIST2H3PS2Q5TEC6 136 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 SIGLEC7Q9Y286 467 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 RNF165Q6ZSG1 346 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 OR1S2Q8NGQ3 325 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 AUNIPQ9H7T9 357 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 ZNF355PQ9NSJ1 428 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 C20orf141Q9NUB4 165 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 PROCRQ9UNN8 238 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 SIRPB1O00241 398 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 SSX2Q16385 188 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 OR8G2PQ6IF36 304 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 LIN37Q96GY3 246 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-204ENST00000400337 COX14Q96I36 57 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 EGLN1Q9GZT9 426 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 STRCP1A6NGW2 1772 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 XRCC2O43543 280 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 C1QBP02746 253 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 CD3DP04234 171 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 CELA2BP08218 269 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-204ENST00000400337 GIPP09681 153 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-204ENST00000400337 ESCO2Q56NI9 601 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 RBMXL3Q8N7X1 1067 aaKnown RBP16.43■□□□□ 0.22
COL18A1-204ENST00000400337 SLC30A7Q8NEW0 376 aa16.43■□□□□ 0.22
COL18A1-204ENST00000400337 ST7LQ8TDW4 575 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms