RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 COQ3Q9NZJ6 369 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 DLEC1Q9Y238 1755 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 STMND1H3BQB6 276 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 PRICKLE3O43900 615 aaPredicted RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 FZD6O60353 706 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 OR4E1P0C645 316 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 COX5AP20674 150 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 POLR2IP36954 125 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 CLDN15P56746 228 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 RPL18Q07020 188 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 FUT7Q11130 342 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 ACKR1Q16570 336 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 PRTGQ2VWP7 1150 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 ZNF750Q32MQ0 723 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 NKAIN1Q4KMZ8 207 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 PRAMEF5Q5TYX0 476 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 PRAMEF6Q5VXH4 476 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 TMEFF1Q8IYR6 380 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 OR51E1Q8TCB6 317 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 BSCL2Q96G97 398 aaPredicted RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 THOC3Q96J01 351 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 NTN4Q9HB63 628 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 HINT3Q9NQE9 182 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 RPH3ALQ9UNE2 315 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 BHLHE40O14503 412 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 ZP3P21754 424 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 FPR2P25090 351 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 C21orf58P58505 322 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 PHLDA2Q53GA4 152 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 RPS19BP1Q86WX3 136 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 CMTM4Q8IZR5 234 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 FAM71CQ8NEG0 241 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 OR10P1Q8NGE3 313 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 UQCC2Q9BRT2 126 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 GAR1Q9NY12 217 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 CHST2Q9Y4C5 530 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 M0R135 149 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 ICOSLGO75144 302 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 SLC2A1P11166 492 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 RPL12P30050 165 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 FCGR2CP31995 323 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 BMI1P35226 326 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 DSCR4P56555 118 aaPredicted RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 TRA2AQ13595 282 aaKnown RBP eCLIP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 ENDOGQ14249 297 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 MPPED2Q15777 294 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 CCSMST1Q4G0I0 132 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 CD300LDQ6UXZ3 194 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 UBALD2Q8IYN6 164 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 NHLRC2Q8NBF2 726 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 SLC37A2Q8TED4 501 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 SMIM4Q8WVI0 70 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 PELI1Q96FA3 418 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 ZNF799Q96GE5 643 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 MED9Q9NWA0 146 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 YTHDF2Q9Y5A9 579 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 CCDC163A0A0D9SF12 145 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 TO15178 435 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 OPN1LWP04000 364 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 CT45A10P0DMU9 189 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 ERHP84090 104 aaKnown RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 KIAA0141Q14154 515 aaPredicted RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 ZNF239Q16600 458 aaKnown RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 TRMT12Q53H54 448 aaKnown RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 BCDIN3DQ7Z5W3 292 aaKnown RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 PTOV1Q86YD1 416 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 SARAFQ96BY9 339 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 ZNF764Q96H86 408 aaPredicted RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 CGGBP1Q9UFW8 167 aaPredicted RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 OSGIN2Q9Y236 505 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 PPIL1Q9Y3C6 166 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 SIPA1L3O60292 1781 aaPredicted RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 ZNF816-ZNF321PA0A0X1KG74 233 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 ANKRD61A6NGH8 418 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 OR5H14A6NHG9 310 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 CTSLP07711 333 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 RNF4P78317 190 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 DGCR2P98153 550 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 H3F3CQ6NXT2 135 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 RPUSD3Q6P087 351 aaKnown RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 RSPO2Q6UXX9 243 aaPredicted RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 SFT2D1Q8WV19 159 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 EDARADDQ8WWZ3 215 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 PP6455Q8WZ26 134 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 TVP23CQ96ET8 276 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 WDR34Q96EX3 536 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 C14orf79Q96F83 325 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 CTRCQ99895 268 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 ZNF385DQ9H6B1 395 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 MYH9P35579 1960 aaKnown RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 FGF17O60258 216 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 CSNK1EP49674 416 aaKnown RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 C2orf76Q3KRA6 126 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 ZNF705AQ6ZN79 300 aaPredicted RBP7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 ARRDC1Q8N5I2 433 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 TMEM217Q8N7C4 229 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 WFDC5Q8TCV5 224 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 CHAC2Q8WUX2 184 aa7.59□□□□□ -1.19
SPTLC3-201ENST00000399002 H1FXQ92522 213 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms