RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ELAVL1Q15717 326 aaKnown RBP14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 AKIRIN2Q53H80 203 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 CLEC1AQ8NC01 280 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 DCBLD2Q96PD2 775 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 GAS2L1Q99501 681 aaPredicted RBP14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 ELOVL3Q9HB03 270 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 RPS10P5Q9NQ39 176 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 LOC390937A0A1W2PQ73 354 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 METTL21EPA6NDL7 271 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 C11orf98E9PRG8 122 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 WNT11O96014 354 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 RENP00797 406 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 HNRNPA2B1P22626 353 aaKnown RBP14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 SSBP1Q04837 148 aaKnown RBP14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 RASGEF1BQ0VAM2 473 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 MEP1BQ16820 701 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 NKPD1Q17RQ9 610 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 ZNF627Q7L945 461 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 REC114Q7Z4M0 266 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 GABRG1Q8N1C3 465 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 ZNF383Q8NA42 475 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 AKR7LQ8NHP1 331 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 SLAMF9Q96A28 289 aa14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 NOP16Q9Y3C1 178 aaKnown RBP14.34□□□□□ -0.11
CHMP1A-201ENST00000397901 MFNGO00587 321 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 SRPX2O60687 465 aaPredicted RBP14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 PLGP00747 810 aaPredicted RBP14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 SFTPCP11686 197 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 NDUFB7P17568 137 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 EGR3Q06889 387 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 OR7A5Q15622 319 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 PNLIPRP3Q17RR3 467 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 ANGPTL5Q86XS5 388 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 OR1J2Q8NGS2 313 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 ZNF563Q8TA94 476 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 TMED6Q8WW62 240 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 TAAR8Q969N4 342 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 MALSU1Q96EH3 234 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 SAT2Q96F10 170 aaPredicted RBP14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 MRGPRX1Q96LB2 322 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 MESP1Q9BRJ9 268 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 POTEKPQ9BYX7 375 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 HRH4Q9H3N8 390 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 ZMAT3Q9HA38 289 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 GFOD1Q9NXC2 390 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 LPAR3Q9UBY5 353 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 CLDN16Q9Y5I7 305 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 LOC100289279A0A1B0GTE1 492 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 A6NLC8 198 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 C17orf51A8MQB3 221 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 HLA-GP17693 338 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 ACKR3P25106 362 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 SCAND1P57086 179 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 DHRS2Q13268 280 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 SKP2Q13309 424 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 PYY3Q5JQD4 70 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 PRAMEF17Q5VTA0 474 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 ASPHD2Q6ICH7 369 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 ETV3LQ6ZN32 361 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 Q6ZSR6 202 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 ZNF440Q8IYI8 595 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 RHOVQ96L33 236 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 FBXO4Q9UKT5 387 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 MRPS33Q9Y291 106 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 EYSQ5T1H1 3165 aa14.33□□□□□ -0.12
CHMP1A-201ENST00000397901 TEX13DA0A0J9YY54 714 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 CPED1A4D0V7 1026 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 CCSO14618 274 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 DOK2O60496 412 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 RAB3DO95716 219 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 TXNDC12O95881 172 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 LIPCP11150 499 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 TACR3P29371 465 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 KRBOX4Q5JUW0 171 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 NCMAPQ5T1S8 102 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 TMEM205Q6UW68 189 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 GALNT16Q8N428 558 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 PAQR4Q8N4S7 273 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 ZBTB8AQ96BR9 441 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 NECAB3Q96P71 396 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 SSX3Q99909 188 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 CACFD1Q9UGQ2 172 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 TIMM10BQ9Y5J6 103 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 SLC17A2O00624 439 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 ZNF208O43345 1280 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 PNPP00491 289 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 CD5P06127 495 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 C1orf61Q13536 156 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 HMGN3Q15651 99 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 C1QL3Q5VWW1 255 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 ARMC6Q6NXE6 501 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 ARHGEF39Q8N4T4 335 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 ZNF321PQ8N8H1 164 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 ZNF615Q8N8J6 731 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 KDF1Q8NAX2 398 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 OR4K17Q8NGC6 315 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 OTOSQ8NHW6 89 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 GPX8Q8TED1 209 aa14.32□□□□□ -0.12
CHMP1A-201ENST00000397901 SEMA6CQ9H3T2 930 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms