RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ST6GALNAC2Q9UJ37 374 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 FAM96BQ9Y3D0 163 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 FREM3P0C091 2139 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 hCG_1809904A0A1W2PP81 198 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 A0A1W2PPH5 198 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 A0A1W2PR64 198 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 A0A1W2PRV1 198 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 RNASEK-C17orf49H0YIS7 233 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 ADAM10O14672 748 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 PIN1P1O15428 100 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 MED6O75586 246 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 YIF1AO95070 293 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 IL33O95760 270 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 TNFP01375 233 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 CD8AP01732 235 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 EDN3P14138 238 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 ACKR3P25106 362 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 CASRP41180 1078 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 AKR1C3P42330 323 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 RBM34P42696 430 aaKnown RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 P2RX1P51575 399 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 CTXN1P60606 82 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 CBFBQ13951 182 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 KIAA0141Q14154 515 aaPredicted RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 ATXN7L3Q14CW9 347 aaPredicted RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 ELAVL1Q15717 326 aaKnown RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 INPP5JQ15735 1006 aaPredicted RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 TOMM34Q15785 309 aaPredicted RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 TM4SF20Q53R12 229 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 DMRTC1Q5HYR2 192 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 LPCAT3Q6P1A2 487 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 ARHGAP11AQ6P4F7 1023 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 UNQ6126/PRO20091Q6UXV3 157 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 C16orf47Q6ZP98 133 aaPredicted RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 NDUFAF7Q7L592 441 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 OVCH1Q7RTY7 1134 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 TMPRSS12Q86WS5 348 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 BCORP1Q8N888 145 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 OR10R2Q8NGX6 335 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 SYNPRQ8TBG9 265 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 DUSP19Q8WTR2 217 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 EDAQ92838 391 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 ELSPBP1Q96BH3 223 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 KTI12Q96EK9 354 aaPredicted RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 ALG12Q9BV10 488 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 RTN4RQ9BZR6 473 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 DUSP15Q9H1R2 295 aaPredicted RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 OR10A5Q9H207 317 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 SYT4Q9H2B2 425 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 EXO5Q9H790 373 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 BCO1Q9HAY6 547 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 APMAPQ9HDC9 416 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 Q9N2J8 555 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 PRTFDC1Q9NRG1 225 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 NCDNQ9UBB6 729 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 CHRNA9Q9UGM1 479 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 CD207Q9UJ71 328 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 MOKQ9UQ07 419 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 KPTNQ9Y664 436 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 LOC100509620A0A075B734 347 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 C17orf105B2RV13 164 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 NKX2-2O95096 273 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 PMS2P2O95744 297 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 OPN1LWP04000 364 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 SLC35E2P0CK97 266 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 S1PR1P21453 382 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 RPS4Y1P22090 263 aaKnown RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 G0S2P27469 103 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 AKT2P31751 481 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 CAV2P51636 162 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 HNRNPKP61978 463 aaKnown RBP eCLIP4.52□□□□□ -1.69
SSR1-202ENST00000397511 ZP2Q05996 745 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 GAMTQ14353 236 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 GAS6Q14393 721 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 SURF2Q15527 256 aaPredicted RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 OR8G1Q15617 311 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 CSRP2Q16527 193 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 NKPD1Q17RQ9 610 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 DEFB133Q30KQ1 61 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 VWA2Q5GFL6 755 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 C1orf189Q5VU69 101 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 LIPNQ5VXI9 398 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 CDPF1Q6NVV7 123 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 C1QL4Q86Z23 238 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 NPEPL1Q8NDH3 523 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 CCDC54Q8NEL0 328 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 STEAP2Q8NFT2 490 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 OR56B1Q8NGI3 324 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 OR10D4PQ8NGN7 298 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 OR6N1Q8NGY5 312 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 NUDCD2Q8WVJ2 157 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 MAFIPQ8WZ33 124 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 DVL3Q92997 716 aaPredicted RBP4.52□□□□□ -1.69
SSR1-202ENST00000397511 RAB24Q969Q5 203 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 CTHRC1Q96CG8 243 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 STACQ99469 402 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 GFI1Q99684 422 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 GABRG3Q99928 467 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 SUCNR1Q9BXA5 334 aa4.52□□□□□ -1.69
SSR1-202ENST00000397511 PRO1933Q9H354 126 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms