RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TTMPQ5BVD1 217 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 RABL3Q5HYI8 236 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 GPR157Q5UAW9 335 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 CD276Q5ZPR3 534 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 OLFML2AQ68BL7 652 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 C1orf94Q6P1W5 598 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 Q6YL49 198 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 IGFN1Q86VF2 1251 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 JAZF1Q86VZ6 243 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 GLB1L2Q8IW92 636 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 FITM2Q8N6M3 262 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 OR8B3Q8NGG8 313 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 OR1F12Q8NHA8 337 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 TAF15Q92804 592 aaKnown RBP eCLIP7.3□□□□□ -1.24
CAPN3-208ENST00000397204 ERGIC1Q969X5 290 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 PRRC1Q96M27 445 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 OR8B2Q96RD0 313 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 CCT8L2Q96SF2 557 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 CITED1Q99966 193 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 SLC30A2Q9BRI3 323 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 NUDT16L1Q9BRJ7 211 aaKnown RBP7.3□□□□□ -1.24
CAPN3-208ENST00000397204 MMP27Q9H306 513 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 TMEM100Q9NV29 134 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 PDP1Q9P0J1 537 aaPredicted RBP7.3□□□□□ -1.24
CAPN3-208ENST00000397204 ARMCX1Q9P291 453 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 CLN8Q9UBY8 286 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 POMT1Q9Y6A1 747 aa7.3□□□□□ -1.24
CAPN3-208ENST00000397204 DOCK11Q5JSL3 2073 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 TRAV27A0A087WT01 109 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 TRAV40A0A0B4J280 105 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 TEX13CA0A0J9YWL9 993 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 A0A1B0GWJ7 208 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 CLPSL1A2RUU4 121 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 PHYHO14832 338 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 TNFRSF13BO14836 293 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-208ENST00000397204 PIP5K1CO60331 668 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 KHDRBS3O75525 346 aaKnown RBP7.29□□□□□ -1.24
CAPN3-208ENST00000397204 ZNF205O95201 554 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 SELEP16581 610 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 RPL4P36578 427 aaKnown RBP7.29□□□□□ -1.24
CAPN3-208ENST00000397204 NPY4RP50391 375 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 SRSF4Q08170 494 aaKnown RBP7.29□□□□□ -1.24
CAPN3-208ENST00000397204 HLXQ14774 488 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-208ENST00000397204 PDCD1Q15116 288 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 KCNMB1Q16558 191 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 ZBED5Q49AG3 693 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 CCDC92Q53HC0 331 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-208ENST00000397204 COQ5Q5HYK3 327 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 BEND6Q5SZJ8 279 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-208ENST00000397204 WDR25Q64LD2 544 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-208ENST00000397204 OR2T2Q6IF00 324 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 FIP1L1Q6UN15 594 aaKnown RBP7.29□□□□□ -1.24
CAPN3-208ENST00000397204 BRD3OSQ6XYD6 125 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 ZNF620Q6ZNG0 422 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 DCDC5Q6ZRR9 648 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 TMPRSS11FQ6ZWK6 438 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 NRMQ8IXM6 262 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 OR5AS1Q8N127 324 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 CELF2-AS1Q8N7Q2 184 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 GJC3Q8NFK1 279 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 ZNF420Q8TAQ5 688 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-208ENST00000397204 DYDC1Q8WWB3 177 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 LZICQ8WZA0 190 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 SLC7A6Q92536 515 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 APOBEC3DQ96AK3 386 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-208ENST00000397204 FNDC11Q9BVV2 318 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 NDEL1Q9GZM8 345 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 MRGBPQ9NV56 204 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 C1RLQ9NZP8 487 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 KIF17Q9P2E2 1029 aa7.29□□□□□ -1.24
CAPN3-208ENST00000397204 A0A087WUU8 490 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 MDFIC2A0A1B0GVS7 189 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 IQCF6A8MYZ5 107 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 H0YL77 283 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 H7C1C5 153 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 P2RY10O00398 339 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 ENSAO43768 121 aaKnown RBP7.28□□□□□ -1.24
CAPN3-208ENST00000397204 SLC16A7O60669 478 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 PTP4A3O75365 173 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 IRF2P14316 349 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 CTLA4P16410 223 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 PMELP40967 661 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 ERFP50548 548 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 FGF12P61328 243 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 LCN6P62502 163 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 HIST1H3AP68431 136 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 TRAM2Q15035 370 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 MESTQ5EB52 335 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 HIST2H3PS2Q5TEC6 136 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 GPR139Q6DWJ6 353 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 ZNF841Q6ZN19 808 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 MBOAT2Q6ZWT7 520 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 HIST2H3AQ71DI3 136 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 RHOUQ7L0Q8 258 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 RRM2BQ7LG56 351 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 MOGAT3Q86VF5 341 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 MICU2Q8IYU8 434 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 OFCC1Q8IZS5 231 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 OR10AD1Q8NGE0 317 aa7.28□□□□□ -1.24
CAPN3-208ENST00000397204 OR11L1Q8NGX0 322 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms