RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 FPR3P25089 353 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 TOP3AQ13472 1001 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-202ENST00000396629 ALG10Q5BKT4 473 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 FOXB2Q5VYV0 432 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 BLOC1S3Q6QNY0 202 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 METAP1DQ6UB28 335 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-202ENST00000396629 VMO1Q7Z5L0 202 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 PDZD9Q8IXQ8 264 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 LRRC75AQ8NAA5 344 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 C11orf65Q8NCR3 313 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 OR4S1Q8NGB4 309 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 OR5R1Q8NH85 324 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 TMEM255BQ8WV15 326 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 WWC2-AS2Q96NR7 200 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 ECSITQ9BQ95 431 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 CPPED1Q9BRF8 314 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-202ENST00000396629 SEMA6AQ9H2E6 1030 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 PPA2Q9H2U2 334 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 MMADHCQ9H3L0 296 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-202ENST00000396629 CNTD2Q9H8S5 307 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 SIGLEC9Q9Y336 463 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 NOTCH3Q9UM47 2321 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 A6NIZ1 184 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 K7EIL1 84 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 ADAM20O43506 726 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 NDUFA2O43678 99 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 MPIG6BO95866 241 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 RAP1BP61224 184 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 RAP1AP62834 184 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 HOXA4Q00056 320 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-202ENST00000396629 CDONQ4KMG0 1287 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 CCDC92Q53HC0 331 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-202ENST00000396629 INTS11Q5TA45 600 aaKnown RBP6.92□□□□□ -1.3
SCFD1-202ENST00000396629 C1orf122Q6ZSJ8 110 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 BTN2A1Q7KYR7 527 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 KLHDC1Q8N7A1 406 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 C11orf44Q8N8P7 122 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 OR1F12Q8NHA8 337 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 TMEM239Q8WW34 195 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 APOBEC3DQ96AK3 386 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-202ENST00000396629 ITPKCQ96DU7 683 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 TOR3AQ9H497 397 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 RNF7Q9UBF6 113 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 ATPIF1Q9UII2 106 aa6.92□□□□□ -1.3
SCFD1-202ENST00000396629 A0A1B0GVI7 797 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 ELOVL7A1L3X0 281 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 FBP2O00757 339 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 OR10H3O60404 316 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 HLA-DPB1P04440 258 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 DBHP09172 617 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 CTXN1P60606 82 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 EMX1Q04741 257 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-202ENST00000396629 AQP6Q13520 282 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 MPPED2Q15777 294 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 PRAMEF6Q5VXH4 476 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 PATL1Q86TB9 770 aaKnown RBP6.91□□□□□ -1.3
SCFD1-202ENST00000396629 CALHM3Q86XJ0 350 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 LY6G5BQ8NDX9 201 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 BHLHE23Q8NDY6 225 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 PPP1R35Q8TAP8 253 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 TAMM41Q96BW9 452 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 SPDL1Q96EA4 605 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 DMRTB1Q96MA1 342 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 ZNF583Q96ND8 569 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 POLR2J2Q9GZM3 115 aaKnown RBP6.91□□□□□ -1.3
SCFD1-202ENST00000396629 POLR2J3Q9H1A7 115 aaKnown RBP6.91□□□□□ -1.3
SCFD1-202ENST00000396629 TRIM36Q9NQ86 728 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 RPUSD1Q9UJJ7 312 aaKnown RBP6.91□□□□□ -1.3
SCFD1-202ENST00000396629 TRAV38-1A0A0B4J264 116 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 DVL1O14640 695 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 NPFFO15130 113 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 OR5F1O95221 314 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 PTBP3O95758 552 aaKnown RBP6.91□□□□□ -1.3
SCFD1-202ENST00000396629 SFRP4Q6FHJ7 346 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-202ENST00000396629 CCBE1Q6UXH8 406 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-202ENST00000396629 DLEU7Q6UYE1 221 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 COLCA1Q6ZS62 124 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 MMP28Q9H239 520 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 RANBP3Q9H6Z4 567 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-202ENST00000396629 UFSP2Q9NUQ7 469 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 KAAG1Q9UBP8 84 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 RIMS3Q9UJD0 308 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 MED31Q9Y3C7 131 aa6.91□□□□□ -1.3
SCFD1-202ENST00000396629 HTR3EA5X5Y0 456 aa6.9□□□□□ -1.3
SCFD1-202ENST00000396629 OOEPA6NGQ2 149 aa6.9□□□□□ -1.3
SCFD1-202ENST00000396629 RGS16O15492 202 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-202ENST00000396629 AHCYL1O43865 530 aa6.9□□□□□ -1.3
SCFD1-202ENST00000396629 LSM6P62312 80 aaKnown RBP6.9□□□□□ -1.3
SCFD1-202ENST00000396629 FHL1Q13642 323 aa6.9□□□□□ -1.3
SCFD1-202ENST00000396629 NSUN5P1Q3KNT7 163 aa6.9□□□□□ -1.3
SCFD1-202ENST00000396629 TNFAIP8L3Q5GJ75 292 aa6.9□□□□□ -1.3
SCFD1-202ENST00000396629 BEND6Q5SZJ8 279 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-202ENST00000396629 LYG1Q8N1E2 194 aa6.9□□□□□ -1.3
SCFD1-202ENST00000396629 PAIP2Q9BPZ3 127 aaKnown RBP6.9□□□□□ -1.3
SCFD1-202ENST00000396629 HCAR1Q9BXC0 346 aa6.9□□□□□ -1.3
SCFD1-202ENST00000396629 FN3KRPQ9HA64 309 aa6.9□□□□□ -1.3
SCFD1-202ENST00000396629 KCNK9Q9NPC2 374 aa6.9□□□□□ -1.3
SCFD1-202ENST00000396629 TEX13CA0A0J9YWL9 993 aa6.89□□□□□ -1.31
SCFD1-202ENST00000396629 ADARB2-AS1A8MUL3 147 aa6.89□□□□□ -1.31
SCFD1-202ENST00000396629 H7C1C5 153 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms