RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 GNALP38405 381 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 CX3CR1P49238 355 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 ZNF84P51523 738 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 PRKXP51817 358 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 CAPZA1P52907 286 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 ZNF121P58317 390 aaPredicted RBP13.22□□□□□ -0.29
CBX3-202ENST00000396386 WIPI1Q5MNZ9 446 aaPredicted RBP13.22□□□□□ -0.29
CBX3-202ENST00000396386 ELFN2Q5R3F8 820 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 C1orf100Q5SVJ3 147 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 DNM1P46Q6ZS02 220 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 OR1J2Q8NGS2 313 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 SORCS2Q96PQ0 1159 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 NKX3-1Q99801 234 aaPredicted RBP13.22□□□□□ -0.29
CBX3-202ENST00000396386 ATG5Q9H1Y0 275 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 STMN3Q9NZ72 180 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 KLK11Q9UBX7 282 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 FOXD3Q9UJU5 478 aaPredicted RBP13.22□□□□□ -0.29
CBX3-202ENST00000396386 MED12Q93074 2177 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 DOCK10Q96BY6 2186 aa13.22□□□□□ -0.29
CBX3-202ENST00000396386 CIB4A0PJX0 185 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 DCDC2BA2VCK2 349 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 DHHO43323 396 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 TRAPPC6AO75865 159 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 F10P00742 488 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 ZNF20P17024 532 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 POU3F2P20265 443 aaPredicted RBP13.21□□□□□ -0.29
CBX3-202ENST00000396386 SELENOPP49908 381 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 MRPS15P82914 257 aaKnown RBP13.21□□□□□ -0.29
CBX3-202ENST00000396386 COMMD2Q86X83 199 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 ZNF283Q8N7M2 679 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 ZIC4Q8N9L1 334 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 OR1M1Q8NGA1 313 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 OR8B12Q8NGG6 310 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 OR2V1Q8NHB1 315 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 OR51E1Q8TCB6 317 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 ADAMTS17Q8TE56 1095 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 ACTR6Q9GZN1 396 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 C20orf85Q9H1P6 137 aa13.21□□□□□ -0.29
CBX3-202ENST00000396386 TRAV18A0A075B6X5 111 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 A0A1B0GTI1 187 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 PINLYPA6NC86 204 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 KDM4BO94953 1096 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 TNFSF15O95150 251 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 GABRA1P14867 456 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 CARD18P57730 90 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 NHLH1Q02575 133 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 SPEM2Q0P670 501 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 ENDOGQ14249 297 aaKnown RBP13.21□□□□□ -0.3
CBX3-202ENST00000396386 ABLIM2Q6H8Q1 611 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 CDH24Q86UP0 819 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 NOXA1Q86UR1 476 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 C20orf196Q8IYI0 205 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 OR56B4Q8NH76 319 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 NABP1Q96AH0 204 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 ADAT3Q96EY9 351 aaPredicted RBP13.21□□□□□ -0.3
CBX3-202ENST00000396386 FAM173AQ9BQD7 235 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 UTP23Q9BRU9 249 aaKnown RBP13.21□□□□□ -0.3
CBX3-202ENST00000396386 MED28Q9H204 178 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 GHITMQ9H3K2 345 aa13.21□□□□□ -0.3
CBX3-202ENST00000396386 STMND1H3BQB6 276 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 H7C417 338 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 CXCL13O43927 109 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 GMDSO60547 372 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 YES1P07947 543 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 ITGA3P26006 1051 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 STOMP27105 288 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 CD96P40200 585 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 FOXO1Q12778 655 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 DCAF10Q5QP82 559 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 ZNF813Q6ZN06 617 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 ABHD12BQ7Z5M8 362 aaPredicted RBP13.2□□□□□ -0.3
CBX3-202ENST00000396386 BIVMQ86UB2 503 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 LYPD6Q86Y78 171 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 GJC3Q8NFK1 279 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 OR5D14Q8NGL3 314 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 CAPSLQ8WWF8 208 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 GIMAP1Q8WWP7 306 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 DEDD2Q8WXF8 326 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 RNF170Q96K19 258 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 ADGRG7Q96K78 797 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 IP6K3Q96PC2 410 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 RBM24Q9BX46 236 aaKnown RBP13.2□□□□□ -0.3
CBX3-202ENST00000396386 TMEM138Q9NPI0 162 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 TAS2R8Q9NYW2 309 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 B4GALT7Q9UBV7 327 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 MTFP1Q9UDX5 166 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 RHBDD3Q9Y3P4 386 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 FLVCR1Q9Y5Y0 555 aa13.2□□□□□ -0.3
CBX3-202ENST00000396386 LDLRAD4O15165 306 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 ATP6V1G1O75348 118 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 RBBP9O75884 186 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 NEURL1O76050 574 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
CBX3-202ENST00000396386 CSF1P09603 554 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 SLC2A1P11166 492 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 RAB3AP20336 220 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 FAUP35544 74 aaKnown RBP13.19□□□□□ -0.3
CBX3-202ENST00000396386 MAB21L1Q13394 359 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 TMEM255AQ5JRV8 349 aa13.19□□□□□ -0.3
CBX3-202ENST00000396386 SPINK14Q6IE38 97 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms