RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 POTEKPQ9BYX7 375 aa3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 UCK2Q9BZX2 261 aa3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 ACTR3CQ9C0K3 210 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 SRRQ9GZT4 340 aa3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 RPF2Q9H7B2 306 aaKnown RBP3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 BEX1Q9HBH7 125 aa3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 SLC17A7Q9P2U7 560 aa3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 PRG3Q9Y2Y8 225 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 F11RQ9Y624 299 aaKnown RBP3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 LRPPRCP42704 1394 aaKnown RBP3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 ATRXP46100 2492 aa3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 ANKRD30AQ9BXX3 1397 aa3.48□□□□□ -1.85
HMGB1P10-201ENST00000395823 ELP1O95163 1332 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 MAPK8IP3Q9UPT6 1336 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 CENPXA8MT69 81 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 RNASEK-C17orf49H0YIS7 233 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 SLC31A2O15432 143 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 EMC8O43402 210 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 DPM1O60762 260 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 CLDN11O75508 207 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 C6orf47O95873 294 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 CD160O95971 181 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 HMGN1P05114 100 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 KRT16P08779 473 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 CSF3P09919 207 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 UBCP0CG48 685 aaKnown RBP3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 CNR1P21554 472 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 CD82P27701 267 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 SERPINB5P36952 375 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 CSNK1DP48730 415 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 TUFMP49411 452 aaKnown RBP3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 TAF6P49848 677 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 NCBP2P52298 156 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 RPS21P63220 83 aaKnown RBP3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 GGTLC2Q14390 218 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 ZNF726P1Q15940 193 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 AKIRIN2Q53H80 203 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 C5orf47Q569G3 176 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 ZNF691Q5VV52 312 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 OTPQ5XKR4 325 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 COX15Q7KZN9 410 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 MRPL21Q7Z2W9 205 aaKnown RBP3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 SUMF2Q8NBJ7 301 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 ZNF680Q8NEM1 530 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 OR1N2Q8NGR9 330 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 OR2G3Q8NGZ4 309 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 ACER1Q8TDN7 264 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 TMEM239Q8WW34 195 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 DYDC1Q8WWB3 177 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 MYDGFQ969H8 173 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 CCDC127Q96BQ5 260 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 PIK3IP1Q96FE7 263 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 COL21A1Q96P44 957 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 GABARAPL3Q9BY60 117 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 OR2AG1Q9H205 316 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 SLC38A1Q9H2H9 487 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 VCX3AQ9NNX9 186 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 SLC40A1Q9NP59 571 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 OR2S2Q9NQN1 319 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 ZC4H2Q9NQZ6 224 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 HRASLS2Q9NWW9 162 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 MYEF2Q9P2K5 600 aaKnown RBP3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 LGALS13Q9UHV8 139 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 TRAPPC4Q9Y296 219 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 GOLT1BQ9Y3E0 138 aa3.47□□□□□ -1.85
HMGB1P10-201ENST00000395823 SMARCA2P51531 1590 aa3.46□□□□□ -1.85
HMGB1P10-201ENST00000395823 FHAD1B1AJZ9 1412 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 A0A1B0GW55 424 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 GOLGA6L10A6NI86 522 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 ARGFXA6NJG6 315 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 ERI2A8K979 691 aaKnown RBP3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 HIDE1A8MVS5 230 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 PRAMEF26H0Y7S4 382 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 K7EMT4 169 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 PGRMC1O00264 195 aaKnown RBP3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 ZBTB5O15062 677 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 SIVA1O15304 175 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 GATCO43716 136 aaKnown RBP3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 HSBP1O75506 76 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 ETHE1O95571 254 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 AIFM1O95831 613 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 CST4P01036 141 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 IGKV3-15P01624 115 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 DUX4L2P0CJ85 424 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 DUX4L3P0CJ86 424 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 DUX4L4P0CJ87 422 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 DUX4L5P0CJ88 424 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 DUX4L6P0CJ89 424 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 DUX4L7P0CJ90 424 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 SLC35E2BP0CK96 405 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 IDO1P14902 403 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 CD1EP15812 388 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 CTRB1P17538 263 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 OR1E1P30953 314 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 UGT2B10P36537 528 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 GPX4P36969 197 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 SLC26A3P40879 764 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 NBL1P41271 181 aa3.46□□□□□ -1.86
HMGB1P10-201ENST00000395823 RAP1GDS1P52306 607 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms