RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 RNF113BQ8IZP6 322 aaKnown RBP17.57■□□□□ 0.4
TRAF4-203ENST00000394925 TMEM86BQ8N661 226 aa17.57■□□□□ 0.4
TRAF4-203ENST00000394925 ACOT11Q8WXI4 607 aaPredicted RBP17.57■□□□□ 0.4
TRAF4-203ENST00000394925 ATP6V1G3Q96LB4 118 aa17.57■□□□□ 0.4
TRAF4-203ENST00000394925 PKP2Q99959 881 aa17.57■□□□□ 0.4
TRAF4-203ENST00000394925 TMEM100Q9NV29 134 aa17.57■□□□□ 0.4
TRAF4-203ENST00000394925 INTS9Q9NV88 658 aaKnown RBP17.57■□□□□ 0.4
TRAF4-203ENST00000394925 POLR1DQ9Y2S0 133 aa17.57■□□□□ 0.4
TRAF4-203ENST00000394925 MRASO14807 208 aa17.56■□□□□ 0.4
TRAF4-203ENST00000394925 FFAR1O14842 300 aa17.56■□□□□ 0.4
TRAF4-203ENST00000394925 ENSAO43768 121 aaKnown RBP17.56■□□□□ 0.4
TRAF4-203ENST00000394925 SFTPBP07988 381 aa17.56■□□□□ 0.4
TRAF4-203ENST00000394925 FPR3P25089 353 aa17.56■□□□□ 0.4
TRAF4-203ENST00000394925 PRSS12P56730 875 aa17.56■□□□□ 0.4
TRAF4-203ENST00000394925 KRR1Q13601 381 aaKnown RBP17.56■□□□□ 0.4
TRAF4-203ENST00000394925 METTL21CQ5VZV1 264 aa17.56■□□□□ 0.4
TRAF4-203ENST00000394925 VTCN1Q7Z7D3 282 aa17.56■□□□□ 0.4
TRAF4-203ENST00000394925 FAM156AQ8NDB6 213 aa17.56■□□□□ 0.4
TRAF4-203ENST00000394925 LZICQ8WZA0 190 aa17.56■□□□□ 0.4
TRAF4-203ENST00000394925 UBE2FQ969M7 185 aa17.56■□□□□ 0.4
TRAF4-203ENST00000394925 FAM71F1Q96KD3 344 aaPredicted RBP17.56■□□□□ 0.4
TRAF4-203ENST00000394925 ATPIF1Q9UII2 106 aa17.56■□□□□ 0.4
TRAF4-203ENST00000394925 FAM220BPB1ANY3 271 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 IFNW1P05000 195 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 CFHR2P36980 270 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 ZNF620Q6ZNG0 422 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 TMPRSS11FQ6ZWK6 438 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 MBOAT2Q6ZWT7 520 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.55■□□□□ 0.4
TRAF4-203ENST00000394925 OR2T12Q8NG77 320 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 TECTBQ96PL2 329 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 RBM4BQ9BQ04 359 aaKnown RBP17.55■□□□□ 0.4
TRAF4-203ENST00000394925 HCAR1Q9BXC0 346 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 NMNAT1Q9HAN9 279 aaPredicted RBP17.55■□□□□ 0.4
TRAF4-203ENST00000394925 KIF17Q9P2E2 1029 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 TMCC3Q9ULS5 477 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 RNF114Q9Y508 228 aa17.55■□□□□ 0.4
TRAF4-203ENST00000394925 P2RY10O00398 339 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 TNFRSF13BO14836 293 aaPredicted RBP17.54■□□□□ 0.4
TRAF4-203ENST00000394925 NPPAP01160 153 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 PSMB10P40306 273 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 GATA4P43694 442 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 CENPAP49450 140 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 HOXA4Q00056 320 aaPredicted RBP17.54■□□□□ 0.4
TRAF4-203ENST00000394925 MAB21L1Q13394 359 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 PDCD1Q15116 288 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 ASPHD2Q6ICH7 369 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 RRM2BQ7LG56 351 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 OR11L1Q8NGX0 322 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 SSMEM1Q8WWF3 244 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 COQ7Q99807 217 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 NDEL1Q9GZM8 345 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 NUAK2Q9H093 628 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 MMADHCQ9H3L0 296 aaPredicted RBP17.54■□□□□ 0.4
TRAF4-203ENST00000394925 UFSP2Q9NUQ7 469 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 ARMCX1Q9P291 453 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 POMT1Q9Y6A1 747 aa17.54■□□□□ 0.4
TRAF4-203ENST00000394925 CENPVL3A0A0U1RRI6 287 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 A0A1B0GWJ7 208 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 ELOVL7A1L3X0 281 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 ZNF879B4DU55 563 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 SOCS2O14508 198 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 EDF1O60869 148 aaKnown RBP17.53■□□□□ 0.4
TRAF4-203ENST00000394925 FAM20BO75063 409 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 TOX4O94842 621 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 SDHAP31040 664 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 MEP1BQ16820 701 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 COQ5Q5HYK3 327 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 CLEC12AQ5QGZ9 265 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 PRAMEF6Q5VXH4 476 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 CORO6Q6QEF8 472 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 GJC3Q8NFK1 279 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 Q8TCH9 128 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 GATAD2BQ8WXI9 593 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 TBX15Q96SF7 602 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 HDHD2Q9H0R4 259 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 VSX1Q9NZR4 365 aaPredicted RBP17.53■□□□□ 0.4
TRAF4-203ENST00000394925 RPS6KA6Q9UK32 745 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 LHFPL6Q9Y693 200 aa17.53■□□□□ 0.4
TRAF4-203ENST00000394925 NDUFB2O95178 105 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 ZNF682O95780 498 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 NPY4RP50391 375 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 HIST1H3AP68431 136 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 MPPED2Q15777 294 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 KCNMB1Q16558 191 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 RSPO1Q2MKA7 263 aaPredicted RBP17.52■□□□□ 0.4
TRAF4-203ENST00000394925 HIST2H3PS2Q5TEC6 136 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 CD276Q5ZPR3 534 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 GPR139Q6DWJ6 353 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 PTCHD4Q6ZW05 846 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 HIST2H3AQ71DI3 136 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 C1QL4Q86Z23 238 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 TBC1D15Q8TC07 691 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 DYRK2Q92630 601 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 ERGIC1Q969X5 290 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 FAM46AQ96IP4 442 aaKnown RBP17.52■□□□□ 0.4
TRAF4-203ENST00000394925 SIKE1Q9BRV8 207 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 NRIP3Q9NQ35 241 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 ACOXLQ9NUZ1 547 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 ERVK-18Q9QC07 812 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms