RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 STEAP2Q8NFT2 490 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 C11orf40Q8WZ69 217 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 TMPRSS13Q9BYE2 586 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 CKLFQ9UBR5 152 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 HHLA2Q9UM44 414 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 NPIPA1Q9UND3 350 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 CCDC163A0A0D9SF12 145 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 OR6C65A6NJZ3 312 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 B8ZZF3 427 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 RP2O75695 350 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 CD2P06729 351 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 PNLIPP16233 465 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 PTGS2P35354 604 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 ARHGDIBP52566 201 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 BIDP55957 195 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 BTN1A1Q13410 526 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 C3orf33Q6P1S2 294 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 GSG1LQ6UXU4 331 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 WDR5BQ86VZ2 330 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 MARVELD3Q96A59 401 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 C5orf34Q96MH7 638 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 KCNK17Q96T54 332 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 MFFQ9GZY8 342 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 GPR160Q9UJ42 338 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 A0A1W2PNR3 127 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 TMEM200CA6NKL6 621 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 GNB3P16520 340 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 TLE3Q04726 772 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 DHRS2Q13268 280 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 LPAL2Q16609 132 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 CFAP77Q6ZQR2 320 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 RHOUQ7L0Q8 258 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 NUP54Q7Z3B4 507 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 ADGRE4PQ86SQ3 457 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 FJX1Q86VR8 437 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 LYPD6Q86Y78 171 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 C12orf45Q8N5I9 185 aaPredicted RBP11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 ZBTB44Q8NCP5 570 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 OR6M1Q8NGM8 313 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 OR13C9Q8NGT0 318 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 IFI44Q8TCB0 444 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 C15orf40Q8WUR7 153 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 NICN1Q9BSH3 213 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 TGIF2Q9GZN2 237 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 TAS2R8Q9NYW2 309 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 PRR13Q9NZ81 148 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 GDF2Q9UK05 429 aaPredicted RBP11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 NUP50Q9UKX7 468 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 EML6Q6ZMW3 1958 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 A0A1W2PP11 408 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF736B4DX44 427 aaPredicted RBP11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 TPD52L2O43399 206 aaKnown RBP11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 TTRP02766 147 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 HOXA6P31267 233 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 DCDP81605 110 aaKnown RBP11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 HSF1Q00613 529 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 PAPD4Q6PIY7 484 aaKnown RBP11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 MAML2Q8IZL2 1156 aaPredicted RBP11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 ST8SIA4Q92187 359 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF75AQ96N20 296 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 SMOC1Q9H4F8 434 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 KIF25Q9UIL4 384 aa11.99□□□□□ -0.49
GTF2F1-201ENST00000394456 ARID1AO14497 2285 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 IGLV3-12A0A075B6K2 115 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 OR6C76A6NM76 312 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 RAB27BO00194 218 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 TSPAN4O14817 238 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 HOXD4P09016 255 aaPredicted RBP11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 H2BFMP0C1H6 154 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 ABOP16442 354 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 CFPP27918 469 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 AVPR2P30518 371 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 PRKXP51817 358 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 TAS2R19P59542 299 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 CDNFQ49AH0 187 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 TMEM81Q6P7N7 255 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 ADAD2Q8NCV1 583 aaKnown RBP11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 OR1S1Q8NH92 325 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 OIT3Q8WWZ8 545 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 CST11Q9H112 138 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF319Q9P2F9 582 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 TRBV11-1A0A0K0K1C0 115 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 CYB5AP00167 134 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 IGHMP01871 453 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 CRABP1P29762 137 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 EMP2P54851 167 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 SCAND1P57086 179 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 ZXDAP98168 799 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 GFOD2Q3B7J2 385 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 ATRAIDQ6UW56 229 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 TRAPPC6BQ86SZ2 158 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 PPP1R3BQ86XI6 285 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 NFAM1Q8NET5 270 aaPredicted RBP11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 C1orf198Q9H425 327 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 FN3KRPQ9HA64 309 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 FAM206AQ9NX38 181 aa11.98□□□□□ -0.49
GTF2F1-201ENST00000394456 GPR179Q6PRD1 2367 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 HMSDA8MTL9 139 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 FAM25EA8MYX2 175 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 TMEM127O75204 238 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms