RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SLC35A1P78382 337 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 TCEA2Q15560 299 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 LDLRAD2Q5SZI1 272 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 KCNIP4Q6PIL6 250 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 SBSNQ6UWP8 590 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 HEPN1Q6WQI6 88 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 SLC39A5Q6ZMH5 540 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF620Q6ZNG0 422 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM182Q6ZP80 229 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 RTN4RL1Q86UN2 441 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 BAGE3Q86Y29 109 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 BAGE2Q86Y30 109 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 OR1L6Q8NGR2 347 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 C16orf58Q96GQ5 468 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 SLC35E1Q96K37 410 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 INSM2Q96T92 566 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 PLA2G12AQ9BZM1 189 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM30AQ9NV96 361 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 WSB1Q9Y6I7 421 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 DOCK3Q8IZD9 2030 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 FAM171A2A8MVW0 826 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF814B7Z6K7 855 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 G3V3Q6 166 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 FGF16O43320 207 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 TRAF3IP2O43734 574 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 SLC2A10O95528 541 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 CD79AP11912 226 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 CST5P28325 142 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 RPS23P62266 143 aaKnown RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 ENDOGQ14249 297 aaKnown RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 ACOT6Q3I5F7 207 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 TPGS2Q68CL5 300 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 CMTM8Q8IZV2 173 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 SIRT6Q8N6T7 355 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 C2orf15Q8WU43 125 aaKnown RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 TFGQ92734 400 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 PRAP1Q96NZ9 151 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM121BQ9BXQ6 578 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 OR52D1Q9H346 318 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 PLEKHA1Q9HB21 404 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM9BQ9NQ34 198 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 RAB22AQ9UL26 194 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 PLPP2O43688 288 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 PIAS2O75928 621 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 GLSO94925 669 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 SOD2P04179 222 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 F13BP05160 661 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 ST6GAL1P15907 406 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 AK4P27144 223 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 CD1CP29017 333 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 TACR3P29371 465 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 HOXC12P31275 282 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 ID4P47928 161 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 GAS6Q14393 721 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 IAH1Q2TAA2 248 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 SGPP2Q8IWX5 399 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 OR51F2Q8NH61 342 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 BCL2L2Q92843 193 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-201ENST00000393077 HIST1H2AAQ96QV6 131 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 TRIB3Q96RU7 358 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 DPH1Q9BZG8 443 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 EGLN1Q9GZT9 426 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 STEAP1Q9UHE8 339 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 INSL5Q9Y5Q6 135 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 MED19A0JLT2 244 aaPredicted RBP6.92□□□□□ -1.3
VTI1A-201ENST00000393077 PPIHO43447 177 aaKnown RBP6.92□□□□□ -1.3
VTI1A-201ENST00000393077 HBE1P02100 147 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 IRF2P14316 349 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 CXCR1P25024 350 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 PNLIPRP1P54315 467 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 SQSTM1Q13501 440 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 PPP1R1AQ13522 171 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 MPPE1Q53F39 396 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 DNM1P34Q6PK57 102 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM220Q6QAJ8 160 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 RD3Q7Z3Z2 195 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 ABHD12BQ7Z5M8 362 aaPredicted RBP6.92□□□□□ -1.3
VTI1A-201ENST00000393077 RNASE8Q8TDE3 154 aaKnown RBP6.92□□□□□ -1.3
VTI1A-201ENST00000393077 FAM216AQ8WUB2 273 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 OR5P2Q8WZ92 322 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 APH1AQ96BI3 265 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 BARX1Q9HBU1 254 aaPredicted RBP6.92□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF701Q9NV72 531 aaPredicted RBP6.92□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF346Q9UL40 294 aaKnown RBP6.92□□□□□ -1.3
VTI1A-201ENST00000393077 MED31Q9Y3C7 131 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 IDSB3KWA1 339 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 ANKRD66B4E2M5 251 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 RAB29O14966 203 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 BCKDHBP21953 392 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 SLC6A6P31641 620 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 GABRA4P48169 554 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 SULT1A2P50226 295 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 KRTDAPP60985 99 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 POLR2LP62875 67 aaKnown RBP6.92□□□□□ -1.3
VTI1A-201ENST00000393077 DEFB103AP81534 67 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF92Q03936 586 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 ABCA11PQ4W5N1 156 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 COMMD2Q86X83 199 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 C17orf47Q8NEP4 570 aa6.92□□□□□ -1.3
VTI1A-201ENST00000393077 PLD4Q96BZ4 506 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms