RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 K7EQM0 130 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 PLPP1O14494 284 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 DEGS1O15121 323 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 TIMM8AO60220 97 aaPredicted RBP14.72□□□□□ -0.05
SHANK1-204ENST00000391814 NTSR1P30989 418 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 PMP22Q01453 160 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 ZNF92Q03936 586 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 ANKRD12Q6UB98 2062 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 SEZ6L2Q6UXD5 910 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 DTWD2Q8NBA8 298 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 SLC38A9Q8NBW4 561 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 SLC16A11Q8NCK7 471 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 NXPH2O95156 264 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 LYRM2Q9NU23 88 aaPredicted RBP14.72□□□□□ -0.05
SHANK1-204ENST00000391814 HCFC1R1Q9NWW0 138 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 ONECUT2O95948 504 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 PTHLHP12272 177 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 RPL13AP40429 203 aaKnown RBP14.72□□□□□ -0.05
SHANK1-204ENST00000391814 RPL27P61353 136 aaKnown RBP14.72□□□□□ -0.05
SHANK1-204ENST00000391814 CDK5R1Q15078 307 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 LYPD8Q6UX82 237 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 SYT13Q7L8C5 426 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 EXD3Q8N9H8 876 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 BCL7CQ8WUZ0 217 aaPredicted RBP14.72□□□□□ -0.05
SHANK1-204ENST00000391814 FAM3CQ92520 227 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 SLC46A1Q96NT5 459 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 CSNK1G1Q9HCP0 422 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 DNMT3BQ9UBC3 853 aaKnown RBP14.72□□□□□ -0.05
SHANK1-204ENST00000391814 UBE2L5PA0A1B0GUS4 154 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 PRR27Q6MZM9 219 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 RNASEKQ6P5S7 137 aaKnown RBP14.72□□□□□ -0.05
SHANK1-204ENST00000391814 MS4A10Q96PG2 267 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 GHRLQ9UBU3 117 aa14.72□□□□□ -0.05
SHANK1-204ENST00000391814 SLC25A4P12235 298 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 FOLR3P41439 243 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 DSC1Q08554 894 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 TMEM267Q0VDI3 215 aaPredicted RBP14.71□□□□□ -0.05
SHANK1-204ENST00000391814 PJVKQ0ZLH3 352 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 FER1L6Q2WGJ9 1857 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 EFSO43281 561 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 DUSP5Q16690 384 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 SH2D5Q6ZV89 423 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 DOK3Q7L591 496 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 OLIG1Q8TAK6 271 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 LHX6Q9UPM6 363 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 SSUH2Q9Y2M2 353 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.71□□□□□ -0.05
SHANK1-204ENST00000391814 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.71□□□□□ -0.05
SHANK1-204ENST00000391814 HBQ1P09105 142 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 SMIM6P0DI80 62 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 PAQR9Q6ZVX9 377 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 IL17BQ9UHF5 180 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 MRPL33O75394 65 aaKnown RBP14.71□□□□□ -0.05
SHANK1-204ENST00000391814 PCMT1P22061 227 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 KCNJ3P48549 501 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 ERVFC1-1P60608 527 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 PRTGQ2VWP7 1150 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 ZNF595Q8IYB9 648 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 MSL2Q9HCI7 577 aa14.71□□□□□ -0.05
SHANK1-204ENST00000391814 ZNF346Q9UL40 294 aaKnown RBP14.71□□□□□ -0.05
SHANK1-204ENST00000391814 NSG1A0A0A6YYJ2 146 aa14.71□□□□□ -0.06
SHANK1-204ENST00000391814 OR5H15A6NDH6 313 aa14.71□□□□□ -0.06
SHANK1-204ENST00000391814 OR5H1A6NKK0 313 aa14.71□□□□□ -0.06
SHANK1-204ENST00000391814 ERVS71-1P61550 626 aa14.71□□□□□ -0.06
SHANK1-204ENST00000391814 NTHL1P78549 312 aa14.71□□□□□ -0.06
SHANK1-204ENST00000391814 VWA1Q6PCB0 445 aa14.71□□□□□ -0.06
SHANK1-204ENST00000391814 MUC20Q8N307 709 aaPredicted RBP14.71□□□□□ -0.06
SHANK1-204ENST00000391814 SUSD2Q9UGT4 822 aa14.71□□□□□ -0.06
SHANK1-204ENST00000391814 TRAV1-2A0A0B4J238 106 aa14.71□□□□□ -0.06
SHANK1-204ENST00000391814 ARRDC5A6NEK1 342 aa14.71□□□□□ -0.06
SHANK1-204ENST00000391814 CRYM-AS1A6NIL9 109 aa14.71□□□□□ -0.06
SHANK1-204ENST00000391814 P2RY12Q9H244 342 aa14.71□□□□□ -0.06
SHANK1-204ENST00000391814 F2RP25116 425 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 LIM2P55344 173 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 DCAF7P61962 342 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 Q1RN00 199 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 PLXDC2Q6UX71 529 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 SIGLEC1Q9BZZ2 1709 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 TSPAN12O95859 305 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 NPPBP16860 134 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 PTOV1Q86YD1 416 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 C11orf42Q8N5U0 333 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 ISOC2Q96AB3 205 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 TMEFF2Q9UIK5 374 aaPredicted RBP14.7□□□□□ -0.06
SHANK1-204ENST00000391814 PTRH2Q9Y3E5 179 aaKnown RBP14.7□□□□□ -0.06
SHANK1-204ENST00000391814 TCF21O43680 179 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 C9orf62Q8N4C0 152 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 GPX8Q8TED1 209 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 CIDEAO60543 219 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 ARG1P05089 322 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 CD200P41217 278 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 FAM209BQ5JX69 171 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 TFAP2EQ6VUC0 442 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 Q6ZN92 141 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 C17orf78Q8N4C9 275 aa14.7□□□□□ -0.06
SHANK1-204ENST00000391814 H1FXQ92522 213 aaKnown RBP14.7□□□□□ -0.06
SHANK1-204ENST00000391814 SBK3P0C264 359 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 OPRM1P35372 400 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 EGR3Q06889 387 aa14.69□□□□□ -0.06
SHANK1-204ENST00000391814 HES1Q14469 280 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms