RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 ANKRD19PQ9H560 264 aa0.28□□□□□ -2.36
RNU6-1040P-201ENST00000383974 ZNF442Q9H7R0 627 aa0.28□□□□□ -2.36
RNU6-1040P-201ENST00000383974 SUN2Q9UH99 717 aa0.28□□□□□ -2.36
RNU6-1040P-201ENST00000383974 A0A1W2PPV9 198 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 SYNGR2O43760 224 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 EEDO75530 441 aaKnown RBP0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 RPA2P15927 270 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MAPK3P27361 379 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 OTX1P32242 354 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 ATP6V1E1P36543 226 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 KLF3P57682 345 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 ANKRD26P1Q6NSI1 321 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CDR2LQ86X02 465 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 C11orf72Q8NBR9 251 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 SCFD1Q8WVM8 642 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PIBF1Q8WXW3 757 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 OTUB2Q96DC9 234 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 RPRD1AQ96P16 312 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 NUDT9Q9BW91 350 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 FBXO8Q9NRD0 319 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TAS2R5Q9NYW4 299 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 HMGXB4Q9UGU5 601 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 RWDD2AQ9UIY3 292 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 ADAM28Q9UKQ2 775 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MYO9BQ13459 2157 aa0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 BRD4O60885 1362 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1040P-201ENST00000383974 NUPL2O15504 423 aaKnown RBP0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PSTPIP1O43586 416 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 SERPINB7O75635 380 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PALMO75781 387 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 IGHG2P01859 326 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 ANGP03950 147 aaKnown RBP0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 IQCF3P0C7M6 154 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CGB3P0DN86 165 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 GPX4P36969 197 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 RBM34P42696 430 aaKnown RBP0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TGM4P49221 684 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CSNK1EP49674 416 aaKnown RBP0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 SSR4P51571 173 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TAS2R43P59537 309 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 YWHAGP61981 247 aaKnown RBP eCLIP0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PNOCQ13519 176 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PDZD11Q5EBL8 140 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TRPV1Q8NER1 839 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 OR10G6Q8NH81 332 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CCDC110Q8TBZ0 833 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 THRSPQ92748 146 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CCDC47Q96A33 483 aaKnown RBP0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 COQ2Q96H96 371 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PKNOX2Q96KN3 472 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 THUMPD2Q9BTF0 503 aaKnown RBP0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TMEM27Q9HBJ8 222 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 ACTR3BQ9P1U1 418 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MTFP1Q9UDX5 166 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 GOLT1BQ9Y3E0 138 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 KIF3AQ9Y496 699 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 KIF16BQ96L93 1317 aa0.26□□□□□ -2.37
RNU6-1040P-201ENST00000383974 GBF1Q92538 1859 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 ATP8B3O60423 1300 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 IGHV1-69DA0A0B4J2H0 117 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 A0A0J9YXV3 536 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 GLYATL1P3A0A0U1RQE8 302 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 A0A1W2PNM2 257 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 IGKV2-29A2NJV5 120 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CDC7O00311 574 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 GATBO75879 557 aaKnown RBP0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 GGT1P19440 569 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MAGEA8P43361 318 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 SS18Q15532 418 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CCDC92Q53HC0 331 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 RIPPLY2Q5TAB7 128 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 LIN9Q5TKA1 542 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 Q6ZPB1 254 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 NPWQ8N729 165 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 OR2A1Q8NGT9 310 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 OR52N1Q8NH53 320 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 C12orf42Q96LP6 360 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TCEANC2Q96MN5 208 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MICU1Q9BPX6 476 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PEX16Q9Y5Y5 336 aa0.25□□□□□ -2.37
RNU6-1040P-201ENST00000383974 DOCK10Q96BY6 2186 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 SMIM26A0A096LP01 95 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TRGV4A0A0C4DH28 118 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 A0A1B0GWJ7 208 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TNFRSF11BO00300 401 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PLPP1O14494 284 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 IDH1O75874 414 aaKnown RBP0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CLPXO76031 633 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CLIC3O95833 236 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 SLC35G6P0C7Q6 338 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 KRT13P13646 458 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TALDO1P37837 337 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 RPS23P62266 143 aaKnown RBP0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 ILKQ13418 452 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 OR7A5Q15622 319 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CCDC73Q6ZRK6 1079 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 DEFB119Q8N690 84 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 OR4F6Q8NGB9 312 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms