RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 DAP3P51398 398 aaKnown RBP11.03□□□□□ -0.64
CIITA-202ENST00000381835 POU4F2Q12837 409 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 TBR1Q16650 682 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 LINGO2Q7L985 606 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 NLRC3Q7RTR2 1065 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 CDH24Q86UP0 819 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 PM20D2Q8IYS1 436 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 RFLNBQ8N5W9 214 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 OR6K6Q8NGW6 343 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 SMIM4Q8WVI0 70 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 ZNRF4Q8WWF5 429 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 ZMYND19Q96E35 227 aaPredicted RBP11.03□□□□□ -0.64
CIITA-202ENST00000381835 ABHD17AQ96GS6 310 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 OXGR1Q96P68 337 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 NAA11Q9BSU3 229 aaPredicted RBP11.03□□□□□ -0.64
CIITA-202ENST00000381835 ACKR4Q9NPB9 350 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 HAO2Q9NYQ3 351 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 ZZEF1O43149 2961 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 TRGV5A0A0B4J1U4 118 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 DCTN6O00399 190 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 CFDP00746 253 aaPredicted RBP11.03□□□□□ -0.64
CIITA-202ENST00000381835 RRASP10301 218 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 GBX2P52951 348 aaPredicted RBP11.03□□□□□ -0.64
CIITA-202ENST00000381835 BLVRAP53004 296 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 BIDP55957 195 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 CXADRP78310 365 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 UBE2NLQ5JXB2 153 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 TMEM65Q6PI78 240 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 WDFY1Q8IWB7 410 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 LGALS14Q8TCE9 139 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 ASB10Q8WXI3 467 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 SMIM19Q96E16 107 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 ZNF845Q96IR2 970 aaPredicted RBP11.03□□□□□ -0.64
CIITA-202ENST00000381835 ADGRG7Q96K78 797 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 NMNAT2Q9BZQ4 307 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 ZCCHC4Q9H5U6 513 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 ZDHHC11Q9H8X9 412 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 FANCFQ9NPI8 374 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 ZNF275Q9NSD4 429 aaPredicted RBP11.03□□□□□ -0.64
CIITA-202ENST00000381835 EMC3Q9P0I2 261 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 FLVCR2Q9UPI3 526 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 RCE1Q9Y256 329 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 CACNA1CQ13936 2221 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 DSPP15924 2871 aaKnown RBP11.03□□□□□ -0.64
CIITA-202ENST00000381835 PRSS37A4D1T9 235 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 OGG1O15527 345 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 UCNP55089 124 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 CLDN18P56856 261 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 TSPAN5P62079 268 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 PON3Q15166 354 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 ROBO4Q8WZ75 1007 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 OR14A2Q96R54 314 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 GSX2Q9BZM3 304 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 CHIAQ9BZP6 476 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 OR10A4Q9H209 315 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 NPTNQ9Y639 398 aa11.02□□□□□ -0.64
CIITA-202ENST00000381835 TRBV2A0A0J9YWF9 115 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 SMAD9O15198 467 aaKnown RBP11.02□□□□□ -0.65
CIITA-202ENST00000381835 GMDSO60547 372 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 TGM6O95932 706 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 UCHL1P09936 223 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 ZNF708P17019 499 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 CCR9P51686 369 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 TAGLNQ01995 201 aaKnown RBP11.02□□□□□ -0.65
CIITA-202ENST00000381835 LGALS3BPQ08380 585 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 CDK5R1Q15078 307 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 C3AR1Q16581 482 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 ZNF239Q16600 458 aaKnown RBP11.02□□□□□ -0.65
CIITA-202ENST00000381835 PDSS1Q5T2R2 415 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 PXDC1Q5TGL8 231 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 EEF1A1P5Q5VTE0 462 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 Q6ZS92 163 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 CMTM4Q8IZR5 234 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 OR6V1Q8N148 313 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 MEIOBQ8N635 442 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 RBMXL3Q8N7X1 1067 aaKnown RBP11.02□□□□□ -0.65
CIITA-202ENST00000381835 SNX33Q8WV41 574 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 PELI1Q96FA3 418 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 HRASLSQ9HDD0 168 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 LUZP4Q9P127 313 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 FKBP7Q9Y680 259 aa11.02□□□□□ -0.65
CIITA-202ENST00000381835 PHF3Q92576 2039 aaKnown RBP11.01□□□□□ -0.65
CIITA-202ENST00000381835 A0A1W2PPL8 197 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 NPIPB13A6NJU9 1138 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 NPIPB4C9JG80 1138 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 NPIPA2E9PIF3 369 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 NPIPA3F8WFD2 350 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 G3V3Q6 166 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 DNPH1O43598 174 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 TRAF3IP2O43734 574 aaPredicted RBP11.01□□□□□ -0.65
CIITA-202ENST00000381835 PRAF2O60831 178 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 GATBO75879 557 aaKnown RBP11.01□□□□□ -0.65
CIITA-202ENST00000381835 WISP2O76076 250 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 ECDO95905 644 aaPredicted RBP11.01□□□□□ -0.65
CIITA-202ENST00000381835 PSMB1P20618 241 aaKnown RBP11.01□□□□□ -0.65
CIITA-202ENST00000381835 VEGFCP49767 419 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 SLC25A1P53007 311 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 ACTA2P62736 377 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 ACTG2P63267 376 aa11.01□□□□□ -0.65
CIITA-202ENST00000381835 SIRPAP78324 504 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms