RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 LRRC30A6NM36 301 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 SNRPBP14678 240 aaKnown RBP10.94□□□□□ -0.66
RPAIN-202ENST00000381208 SEC23BQ15437 767 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 ZNF181Q2M3W8 571 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 RPL13AP3Q6NVV1 102 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 Q6ZR03 302 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 OR52J3Q8NH60 311 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 ERGIC1Q969X5 290 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 NSMCE2Q96MF7 247 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 MRI1Q9BV20 369 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 CDADC1Q9BWV3 514 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 OR52D1Q9H346 318 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 POFUT1Q9H488 388 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 ZMAT3Q9HA38 289 aaKnown RBP10.94□□□□□ -0.66
RPAIN-202ENST00000381208 DDX28Q9NUL7 540 aaKnown RBP10.94□□□□□ -0.66
RPAIN-202ENST00000381208 OR5V1Q9UGF6 321 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 IL20RAQ9UHF4 553 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 TMCC3Q9ULS5 477 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 B9D1Q9UPM9 204 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 LRCH1Q9Y2L9 728 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 ARL2BPQ9Y2Y0 163 aa10.94□□□□□ -0.66
RPAIN-202ENST00000381208 IGLV1-36A0A0B4J1U3 117 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 IQCF6A8MYZ5 107 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 F5H0A9 414 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-202ENST00000381208 TMEM178BH3BS89 294 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 OR10H3O60404 316 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 KRT36O76013 467 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 PPP1R3DO95685 299 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 FSHBP01225 129 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 CFPP27918 469 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 SLC6A9P48067 706 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 FXYD6P3P58550 94 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 SPIBQ01892 262 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 MALLQ13021 153 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 ZNF154Q13106 437 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 ARMCX4Q5H9R4 360 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 LEG1Q6P5S2 330 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 COLCA1Q6ZS62 124 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 ZBTB46Q86UZ6 589 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 PGAM4Q8N0Y7 254 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 LINC00471Q8N535 108 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 CELF2-AS1Q8N7Q2 184 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 SLC26A10Q8NG04 563 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 OR2AJ1Q8NGZ0 328 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 SLC7A6Q92536 515 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 PLEKHA8Q96JA3 519 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 MEGF10Q96KG7 1140 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 SIGLEC11Q96RL6 698 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 SLC30A2Q9BRI3 323 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 IFT27Q9BW83 186 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 C1QTNF5Q9BXJ0 243 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 GCM1Q9NP62 436 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 IL1RAPQ9NPH3 570 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 PTTG3PQ9NZH4 202 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 OPN4Q9UHM6 478 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 NUP50Q9UKX7 468 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 RRP15Q9Y3B9 282 aaKnown RBP10.93□□□□□ -0.66
RPAIN-202ENST00000381208 AUP1Q9Y679 476 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 LHFPL6Q9Y693 200 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 TANC2Q9HCD6 1990 aa10.93□□□□□ -0.66
RPAIN-202ENST00000381208 DIRAS1O95057 198 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 SEMG1P04279 462 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 FABP3P05413 133 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 DBHP09172 617 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 PPIAL4GP0DN37 164 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 ZNF12P17014 697 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 ZFP36P26651 326 aaKnown RBP10.92□□□□□ -0.66
RPAIN-202ENST00000381208 ZMYND11Q15326 602 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 SPRNQ5BIV9 151 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 OR2T2Q6IF00 324 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 BTNL3Q6UXE8 466 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 CCDC121Q6ZUS5 278 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 OR6V1Q8N148 313 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 C3orf56Q8N813 242 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 DEFB108BQ8NET1 73 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 OR52L1Q8NGH7 329 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 GNPDA2Q8TDQ7 276 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 TSSK2Q96PF2 358 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 NMNAT3Q96T66 252 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 PITX2Q99697 317 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 SLC6A7Q99884 636 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 SLC22A4Q9H015 551 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 SRA1Q9HD15 236 aaKnown RBP10.92□□□□□ -0.66
RPAIN-202ENST00000381208 TMEM100Q9NV29 134 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 MIOXQ9UGB7 285 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 INSIG2Q9Y5U4 225 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 DYSFO75923 2080 aa10.92□□□□□ -0.66
RPAIN-202ENST00000381208 A0A1B0GWJ7 208 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 DCTN6O00399 190 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 DCTN3O75935 186 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 IRF2P14316 349 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 HIST1H1CP16403 213 aaKnown RBP10.91□□□□□ -0.66
RPAIN-202ENST00000381208 GATA4P43694 442 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 GSSP48637 474 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 MNAT1P51948 309 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 TPTEP56180 551 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 TSPAN31Q12999 210 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 KRTAP27-1Q3LI81 207 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 SLC18B1Q6NT16 456 aa10.91□□□□□ -0.66
RPAIN-202ENST00000381208 C16orf89Q6UX73 402 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms