RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 METTL27Q8N6F8 245 aaPredicted RBP12.44□□□□□ -0.42
SDC1-202ENST00000381150 OR13H1Q8NG92 308 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 OR4C3Q8NH37 302 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 AKR7LQ8NHP1 331 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 MAFIPQ8WZ33 124 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 PIGQQ9BRB3 760 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 SERTAD3Q9UJW9 196 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 B9D1Q9UPM9 204 aa12.44□□□□□ -0.42
SDC1-202ENST00000381150 URADA6NGE7 173 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 CLN5O75503 358 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 IGHV4-34P06331 123 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 CELA2BP08218 269 aaPredicted RBP12.43□□□□□ -0.42
SDC1-202ENST00000381150 VWA2Q5GFL6 755 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 CORO6Q6QEF8 472 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 SLC16A9Q7RTY1 509 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 RTN4RL2Q86UN3 420 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 ZSCAN4Q8NAM6 433 aaPredicted RBP12.43□□□□□ -0.42
SDC1-202ENST00000381150 HIST1H2BAQ96A08 127 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 OR5AC2Q9NZP5 309 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 RCC2Q9P258 522 aaKnown RBP12.43□□□□□ -0.42
SDC1-202ENST00000381150 MRPS18BQ9Y676 258 aaKnown RBP12.43□□□□□ -0.42
SDC1-202ENST00000381150 XKRYO14609 159 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 BRINP1O60477 761 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 KLK3P07288 261 aaPredicted RBP12.43□□□□□ -0.42
SDC1-202ENST00000381150 MAOAP21397 527 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 LPAR6P43657 344 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 MECP2P51608 486 aaKnown RBP12.43□□□□□ -0.42
SDC1-202ENST00000381150 PRICKLE4Q2TBC4 344 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 OR2B11Q5JQS5 317 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 DHRS11Q6UWP2 260 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 Q6ZRG5 221 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 ZNF101Q8IZC7 436 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 ARHGEF39Q8N4T4 335 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 EDARADDQ8WWZ3 215 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 CTHRC1Q96CG8 243 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 RBM18Q96H35 190 aaKnown RBP12.43□□□□□ -0.42
SDC1-202ENST00000381150 OR51M1Q9H341 326 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 SPACA1Q9HBV2 294 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 A0A1W2PPE2 198 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 H2AFB1P0C5Y9 115 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 OR13C7P0DN81 318 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 NDUFA6P56556 154 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 PPP1CAP62136 330 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 ZNF345Q14585 488 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 RAB30Q15771 203 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 DGAT2L6Q6ZPD8 337 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 COX15Q7KZN9 410 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 KDM8Q8N371 416 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 OR13C3Q8NGS6 347 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 CCDC3Q9BQI4 270 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 FAM86C1Q9NVL1 165 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 ICAM5Q9UMF0 924 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 MMP24Q9Y5R2 645 aa12.43□□□□□ -0.42
SDC1-202ENST00000381150 PUS1Q9Y606 427 aaKnown RBP eCLIP12.43□□□□□ -0.42
SDC1-202ENST00000381150 TMEM212A6NML5 194 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 EFCAB7A8K855 629 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 CD8AP01732 235 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 CRHP06850 196 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 ACAA2P42765 397 aaKnown RBP12.42□□□□□ -0.42
SDC1-202ENST00000381150 AWAT1Q58HT5 328 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 LINC01590Q5TEZ4 76 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 HOXB13Q92826 284 aaPredicted RBP12.42□□□□□ -0.42
SDC1-202ENST00000381150 RERGQ96A58 199 aaPredicted RBP12.42□□□□□ -0.42
SDC1-202ENST00000381150 RAB33BQ9H082 229 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 TAF9BQ9HBM6 251 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 DNAJB12Q9NXW2 375 aaKnown RBP12.42□□□□□ -0.42
SDC1-202ENST00000381150 TCRBV21S2A2A0A5A6 115 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 SLC17A2O00624 439 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 LMX1BO60663 402 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 GPR75O95800 540 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 RENP00797 406 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 CTSBP07858 339 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 OR8U9P0C7N5 309 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 GLI4P10075 376 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 AKT2P31751 481 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 ZNF565Q8N9K5 539 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 TMEM104Q8NE00 496 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 OR8U1Q8NH10 309 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 ANKRD9Q96BM1 317 aaPredicted RBP12.42□□□□□ -0.42
SDC1-202ENST00000381150 KIRREL1Q96J84 757 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 PRRT1Q99946 306 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 DUSP22Q9NRW4 184 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 LPAR3Q9UBY5 353 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 FBXO7Q9Y3I1 522 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 A0A1B0GV90 55 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 C2orf74A8MZ97 194 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 SLC16A7O60669 478 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 TSPAN15O95858 294 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 KIR3DL2P43630 455 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 FHL1Q13642 323 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 CCINQ13939 588 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 CA13Q8N1Q1 262 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 ZNF561Q8N587 486 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 HRASLS2Q9NWW9 162 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 EMC9Q9Y3B6 208 aa12.42□□□□□ -0.42
SDC1-202ENST00000381150 SDCBPO00560 298 aaPredicted RBP12.41□□□□□ -0.42
SDC1-202ENST00000381150 RDH16O75452 317 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 PNPP00491 289 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 IGKV1D-16P01601 117 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 S100A2P29034 98 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms