RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 UNQ6126/PRO20091Q6UXV3 157 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 DCXRQ7Z4W1 244 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 MAP6Q96JE9 813 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 Q96MT0 163 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 IL4I1Q96RQ9 567 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 INTS14Q96SY0 518 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 ELOVL3Q9HB03 270 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 CLN6Q9NWW5 311 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 MYEF2Q9P2K5 600 aaKnown RBP16.66■□□□□ 0.26
GTF3A-201ENST00000381140 AASSQ9UDR5 926 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 ITPR3Q14573 2671 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 TMEM129A0AVI4 362 aa16.65■□□□□ 0.26
GTF3A-201ENST00000381140 TLX2O43763 284 aaPredicted RBP16.65■□□□□ 0.26
GTF3A-201ENST00000381140 CLPTM1O96005 669 aa16.65■□□□□ 0.26
GTF3A-201ENST00000381140 PAX1P15863 534 aa16.65■□□□□ 0.26
GTF3A-201ENST00000381140 SHEQ5VZ18 495 aa16.65■□□□□ 0.26
GTF3A-201ENST00000381140 SPATC1Q76KD6 591 aa16.65■□□□□ 0.26
GTF3A-201ENST00000381140 BCDIN3DQ7Z5W3 292 aaKnown RBP16.65■□□□□ 0.26
GTF3A-201ENST00000381140 KRTAP1-3Q8IUG1 177 aa16.65■□□□□ 0.26
GTF3A-201ENST00000381140 SYNPRQ8TBG9 265 aa16.65■□□□□ 0.26
GTF3A-201ENST00000381140 SLC25A40Q8TBP6 338 aa16.65■□□□□ 0.26
GTF3A-201ENST00000381140 DOK1Q99704 481 aa16.65■□□□□ 0.26
GTF3A-201ENST00000381140 COQ7Q99807 217 aa16.65■□□□□ 0.26
GTF3A-201ENST00000381140 ATF6BQ99941 703 aa16.65■□□□□ 0.26
GTF3A-201ENST00000381140 F5H5K5 113 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 H7C417 338 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 PRODHO43272 600 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 SSX4O60224 188 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 SELENOFO60613 162 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 ADRA2AP08913 450 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 NAA10P41227 235 aaPredicted RBP16.64■□□□□ 0.26
GTF3A-201ENST00000381140 ALDH3B1P43353 468 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 KLF3P57682 345 aaPredicted RBP16.64■□□□□ 0.26
GTF3A-201ENST00000381140 SELENOVP59797 346 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 EIF2B1Q14232 305 aaKnown RBP16.64■□□□□ 0.26
GTF3A-201ENST00000381140 TAF13Q15543 124 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 SMN1Q16637 294 aaKnown RBP16.64■□□□□ 0.26
GTF3A-201ENST00000381140 ZCCHC24Q8N2G6 241 aaKnown RBP16.64■□□□□ 0.26
GTF3A-201ENST00000381140 BPIFB6Q8NFQ5 453 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 OR2J1Q9GZK6 312 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 CENPMQ9NSP4 180 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 SCN3BQ9NY72 215 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 TPRKBQ9Y3C4 175 aa16.64■□□□□ 0.26
GTF3A-201ENST00000381140 MED13LQ71F56 2210 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 M0R233 179 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 LY6HO94772 140 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 SMIM18P0DKX4 95 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 SLC2A5P22732 501 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 GCH1P30793 250 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 MPV17P39210 176 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 NUDT6P53370 316 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 NKPD1Q17RQ9 610 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 ZNF718Q3SXZ3 478 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 SPNS3Q6ZMD2 512 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 DPY19L4Q7Z388 723 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 OR10S1Q8NGN2 331 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 SLAMF6Q96DU3 332 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 Q96MF0 132 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 SORCS2Q96PQ0 1159 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 TPK1Q9H3S4 243 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 POFUT1Q9H488 388 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 PNRC2Q9NPJ4 139 aaKnown RBP16.64■□□□□ 0.25
GTF3A-201ENST00000381140 H2AFY2Q9P0M6 372 aaPredicted RBP16.64■□□□□ 0.25
GTF3A-201ENST00000381140 TAAR3PQ9P1P4 343 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 ATPIF1Q9UII2 106 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 SCOCQ9UIL1 159 aa16.64■□□□□ 0.25
GTF3A-201ENST00000381140 XPNPEP2O43895 674 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 FAM20BO75063 409 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 ENTPD6O75354 484 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 MRPL3P09001 348 aaKnown RBP16.63■□□□□ 0.25
GTF3A-201ENST00000381140 PPOXP50336 477 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 ECH1Q13011 328 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 SLC35D3Q5M8T2 416 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 LCN1P1Q5VSP4 162 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 AADACL4Q5VUY2 407 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 TGIF2LYQ8IUE0 185 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 TSPAN14Q8NG11 270 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 IPCEF1Q8WWN9 437 aaPredicted RBP16.63■□□□□ 0.25
GTF3A-201ENST00000381140 MARS2Q96GW9 593 aaKnown RBP16.63■□□□□ 0.25
GTF3A-201ENST00000381140 ZNF582Q96NG8 517 aaPredicted RBP16.63■□□□□ 0.25
GTF3A-201ENST00000381140 COPS4Q9BT78 406 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 DUSP21Q9H596 190 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 BARX1Q9HBU1 254 aaPredicted RBP16.63■□□□□ 0.25
GTF3A-201ENST00000381140 TBCCD1Q9NVR7 557 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 FKBP14Q9NWM8 211 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 PTTG3PQ9NZH4 202 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 DNAJC27Q9NZQ0 273 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 STARD10Q9Y365 291 aa16.63■□□□□ 0.25
GTF3A-201ENST00000381140 TRIM64CA6NLI5 447 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 MRPS14O60783 128 aaKnown RBP16.62■□□□□ 0.25
GTF3A-201ENST00000381140 ZNF250P15622 560 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 SLC6A9P48067 706 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 EVX1P49640 407 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 SLC35A2P78381 396 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 TEX30Q5JUR7 227 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 NXNL2Q5VZ03 156 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 TIGD4Q8IY51 512 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 KLF14Q8TD94 323 aaPredicted RBP16.62■□□□□ 0.25
GTF3A-201ENST00000381140 SPTSSAQ969W0 71 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 DCLRE1CQ96SD1 692 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms