RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 CITED2Q99967 270 aaPredicted RBP9.87□□□□□ -0.83
CLCN4-202ENST00000380833 TEX101Q9BY14 249 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 CCL26Q9Y258 94 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 MEX3AA1L020 520 aaKnown RBP9.87□□□□□ -0.83
CLCN4-202ENST00000380833 PRKNO60260 465 aaPredicted RBP9.87□□□□□ -0.83
CLCN4-202ENST00000380833 B3GALT4O96024 378 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 RPL12P30050 165 aaKnown RBP9.87□□□□□ -0.83
CLCN4-202ENST00000380833 SSR4P51571 173 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 ZNF385BQ569K4 471 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 TRNP1Q6NT89 227 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 ANKRD16Q6P6B7 361 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 C12orf54Q6X4T0 127 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 FBXO17Q96EF6 278 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 OR5M11Q96RB7 305 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 NRSN2Q9GZP1 204 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 Q9N2K0 584 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 UQCR10Q9UDW1 63 aa9.87□□□□□ -0.83
CLCN4-202ENST00000380833 PLIN4Q96Q06 1357 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 UTS2O95399 124 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 DDAH2O95865 285 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 CPMP14384 443 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 PSMB2P49721 201 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 RELQ04864 619 aaPredicted RBP9.86□□□□□ -0.83
CLCN4-202ENST00000380833 GABRA6Q16445 453 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 MMP21Q8N119 569 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 NPWQ8N729 165 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 SLC38A9Q8NBW4 561 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 OR10P1Q8NGE3 313 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 OR5A2Q8NGI9 324 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 VN1R17PQ8TDU5 208 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 SECTM1Q8WVN6 248 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 SIGLEC10Q96LC7 697 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 ZNF264O43296 627 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 S1PR4O95977 384 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 AMTP48728 403 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 FAM174AQ8TBP5 190 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 ZNF300Q96RE9 604 aaPredicted RBP9.86□□□□□ -0.83
CLCN4-202ENST00000380833 ZFAND5O76080 213 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 SLC35A2P78381 396 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 HNRNPA1L2Q32P51 320 aaKnown RBP9.86□□□□□ -0.83
CLCN4-202ENST00000380833 SEZ6L2Q6UXD5 910 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 AGBL5Q8NDL9 886 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 DVL3Q92997 716 aaPredicted RBP9.86□□□□□ -0.83
CLCN4-202ENST00000380833 OR8B4Q96RC9 309 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 ST6GALNAC4Q9H4F1 302 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 CHST11Q9NPF2 352 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 ASCL3Q9NQ33 180 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 DLL4Q9NR61 685 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 PRSS21Q9Y6M0 314 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 TMEM189-UBE2V1I3L0A0 370 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 GEMIN2O14893 280 aaKnown RBP9.86□□□□□ -0.83
CLCN4-202ENST00000380833 SLC25A17O43808 307 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 SUSD5O60279 629 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 SLC6A8P48029 635 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 EFNA3P52797 238 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 ZNF362Q5T0B9 420 aaPredicted RBP9.86□□□□□ -0.83
CLCN4-202ENST00000380833 SBSNQ6UWP8 590 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 MKXQ8IYA7 352 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 C9orf62Q8N4C0 152 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 OR4B1Q8NGF8 309 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 ISOC2Q96AB3 205 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 WDR89Q96FK6 387 aaPredicted RBP9.86□□□□□ -0.83
CLCN4-202ENST00000380833 CBLN4Q9NTU7 201 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 OBP2AQ9NY56 170 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 NXPH2O95156 264 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 EPXP11678 715 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 MDH2P40926 338 aaKnown RBP9.86□□□□□ -0.83
CLCN4-202ENST00000380833 DAPP51397 102 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 SLC16A12Q6ZSM3 486 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 GALNT16Q8N428 558 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 ANAPC13Q9BS18 74 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 MED17Q9NVC6 651 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 DMAC2Q9NW81 257 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 TAS2R5Q9NYW4 299 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 CBLCQ9ULV8 474 aa9.86□□□□□ -0.83
CLCN4-202ENST00000380833 ARG1P05089 322 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 OR4E1P0C645 316 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 CPEP16870 476 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 POU3F3P20264 500 aaPredicted RBP9.85□□□□□ -0.83
CLCN4-202ENST00000380833 SHC1P29353 583 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 CTSCP53634 463 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 TMEM244Q5VVB8 128 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 C11orf87Q6NUJ2 197 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 AAED1Q7RTV5 226 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 YRDCQ86U90 279 aaKnown RBP9.85□□□□□ -0.83
CLCN4-202ENST00000380833 LGI3Q8N145 548 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 ACOT4Q8N9L9 421 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 ARRDC2Q8TBH0 407 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 MS4A4EQ96PG1 132 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 MTHFD2LQ9H903 347 aaPredicted RBP9.85□□□□□ -0.83
CLCN4-202ENST00000380833 SDR39U1Q9NRG7 319 aaPredicted RBP9.85□□□□□ -0.83
CLCN4-202ENST00000380833 RASL12Q9NYN1 266 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 J3KTA2 159 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 M0QYG6 137 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 VEZF1Q14119 521 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 BMFQ96LC9 184 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 HHATLQ9HCP6 504 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 DNMT3BQ9UBC3 853 aaKnown RBP9.85□□□□□ -0.83
CLCN4-202ENST00000380833 SNX11Q9Y5W9 270 aa9.85□□□□□ -0.83
CLCN4-202ENST00000380833 GNG7O60262 68 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms