RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 NPAP1Q9NZP6 1156 aa10.28□□□□□ -0.76
PTCHD1-201ENST00000379361 ADAM12O43184 909 aa10.28□□□□□ -0.76
PTCHD1-201ENST00000379361 REEP5Q00765 189 aa10.28□□□□□ -0.76
PTCHD1-201ENST00000379361 SLC36A1Q7Z2H8 476 aa10.28□□□□□ -0.76
PTCHD1-201ENST00000379361 SLC15A4Q8N697 577 aa10.28□□□□□ -0.76
PTCHD1-201ENST00000379361 SEH1LQ96EE3 360 aa10.28□□□□□ -0.76
PTCHD1-201ENST00000379361 GPR85P60893 370 aa10.28□□□□□ -0.76
PTCHD1-201ENST00000379361 CTBSQ01459 385 aa10.28□□□□□ -0.76
PTCHD1-201ENST00000379361 RPE65Q16518 533 aa10.28□□□□□ -0.76
PTCHD1-201ENST00000379361 LINC01387J3KSC0 135 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 TAS2R60P59551 318 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 FOXC1Q12948 553 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 PCED1AQ9H1Q7 454 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 MED20Q9H944 212 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 TET2Q6N021 2002 aaPredicted RBP10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 GABRB3P28472 473 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 HOXC5Q00444 222 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 NFATC3Q12968 1075 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 ILKQ13418 452 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 LINC00346Q8IVM7 164 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 OLIG1Q8TAK6 271 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 C5orf49A4QMS7 147 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 TXNDC12O95881 172 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 CBR1P16152 277 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 SDC1P18827 310 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 ZNF385BQ569K4 471 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 PXT1Q8NFP0 134 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 ZDHHC18Q9NUE0 388 aa10.27□□□□□ -0.76
PTCHD1-201ENST00000379361 RNF212Q495C1 297 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 IGDCC3Q8IVU1 814 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 RPA2P15927 270 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 USF1P22415 310 aaPredicted RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 MBOAT2Q6ZWT7 520 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 SSX7Q7RTT5 188 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 TMEM40Q8WWA1 233 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 IGSF5Q9NSI5 407 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 AP5S1Q9NUS5 200 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 PATJQ8NI35 1801 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 KIR2DL1P43626 348 aaPredicted RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 KIR2DL2P43627 348 aaPredicted RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 PRRX1P54821 245 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 PELI1Q96FA3 418 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 FLVCR1Q9Y5Y0 555 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 M0QZQ0 153 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 SIX1Q15475 284 aaPredicted RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 C1QTNF6Q9BXI9 259 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 UBL3O95164 117 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 GCGP01275 180 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 HTR4Q13639 388 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 ANKRD16Q6P6B7 361 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 CPEB2Q7Z5Q1 589 aaKnown RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 OR4A4PQ8NGN8 299 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 DPH3Q96FX2 82 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 PIPP12273 146 aaPredicted RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 POU3F3P20264 500 aaPredicted RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 ZNF239Q16600 458 aaKnown RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 TMEM182Q6ZP80 229 aaPredicted RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 DEFB123Q8N688 67 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 SLC38A9Q8NBW4 561 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 HRASP01112 189 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 SP1P08047 785 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 OR13C7P0DN81 318 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 ELAVL1Q15717 326 aaKnown RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 ALKBH6Q3KRA9 238 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 LAIR1Q6GTX8 287 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 RPS19BP1Q86WX3 136 aaKnown RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 HSD17B11Q8NBQ5 300 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 EIF4E2O60573 245 aaKnown RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 RRASP10301 218 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 NKX2-5P52952 324 aaPredicted RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 RPUSD3Q6P087 351 aaKnown RBP10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 VRK2Q86Y07 508 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 NPWQ8N729 165 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 ZNF485Q8NCK3 441 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 MORN4Q8NDC4 146 aa10.27□□□□□ -0.77
PTCHD1-201ENST00000379361 P2RY10O00398 339 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 HPP00738 406 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 HMGN2P05204 90 aaKnown RBP10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 TPPP2P59282 170 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 Q499Y3 187 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 GPRIN1Q7Z2K8 1008 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 CSF3RQ99062 836 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 NFS1Q9Y697 457 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 KLK10O43240 276 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 HNRNPA3P51991 378 aaKnown RBP10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 PPP1CBP62140 327 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 IER5LQ5T953 404 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 SPNS3Q6ZMD2 512 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 DVL3Q92997 716 aaPredicted RBP10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 PRRX2Q99811 253 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 ACHEP22303 614 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 IAH1Q2TAA2 248 aaPredicted RBP10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 GPR119Q8TDV5 335 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 MARCH4Q9P2E8 410 aaPredicted RBP10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 ANKUB1A6NFN9 424 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 SLC17A1Q14916 467 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 H3F3CQ6NXT2 135 aa10.26□□□□□ -0.77
PTCHD1-201ENST00000379361 DTWD1Q8N5C7 304 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 232.7 ms