RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 GPA33Q99795 319 aa7.94□□□□□ -1.14
PCDH9-202ENST00000377865 PAPOLGQ9BWT3 736 aaKnown RBP7.94□□□□□ -1.14
PCDH9-202ENST00000377865 PBOV1Q9GZY1 135 aa7.94□□□□□ -1.14
PCDH9-202ENST00000377865 ALX4Q9H161 411 aaPredicted RBP7.94□□□□□ -1.14
PCDH9-202ENST00000377865 B4GALT7Q9UBV7 327 aa7.94□□□□□ -1.14
PCDH9-202ENST00000377865 HCFC2Q9Y5Z7 792 aa7.94□□□□□ -1.14
PCDH9-202ENST00000377865 LOC105371267A0A1B0GV96 52 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 RAB27BO00194 218 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 DUS4LO95620 317 aaKnown RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 SMIM6P0DI80 62 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 CBR1P16152 277 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 EIF1P41567 113 aaKnown RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 CDC20BQ86Y33 519 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 C16orf52Q8NHV5 167 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ST8SIA1Q92185 356 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 TSSK2Q96PF2 358 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 NPAS1Q99742 590 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 NTMQ9P121 344 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 FBXO4Q9UKT5 387 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 CDC14CA4D256 554 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 OR6C68A6NDL8 312 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF705GA8MUZ8 300 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF705FA8MVS1 300 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 MPC2O95563 127 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 CNOT4O95628 575 aaKnown RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 FABP1P07148 127 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF705DP0CH99 300 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF705BP0CI00 300 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 MECP2P51608 486 aaKnown RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 TAF9Q16594 264 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF684Q5T5D7 378 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 TMEM182Q6ZP80 229 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 P4HA3Q7Z4N8 544 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF547Q8IVP9 402 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 GPX8Q8TED1 209 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 RBMXL1Q96E39 390 aaKnown RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 NUDT22Q9BRQ3 303 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 MMP25Q9NPA2 562 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 PCDHGA1Q9Y5H4 931 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 TTLL8A6PVC2 850 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 LILRB5O75023 590 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 NFYBP25208 207 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ITGB8P26012 769 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 INPP5JQ15735 1006 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 PRSS54Q6PEW0 395 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 MRPL21Q7Z2W9 205 aaKnown RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 KIAA0907Q7Z7F0 614 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 MRGPREQ86SM8 312 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 SLC38A9Q8NBW4 561 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 OR4D10Q8NGI6 311 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 NANOS1Q8WY41 292 aaKnown RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 MR1Q95460 341 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ASB16Q96NS5 453 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF2Q9BSG1 426 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 WSB2Q9NYS7 404 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 PURGQ9UJV8 347 aaKnown RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 GDF2Q9UK05 429 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 NEUROG3Q9Y4Z2 214 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 LCTP09848 1927 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 C17orf112F2Z3M2 114 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 DOK2O60496 412 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 P04436 131 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 CISD3P0C7P0 127 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 CD37P11049 281 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 FOSL1P15407 271 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 CXCL2P19875 107 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 AADACP22760 399 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 CCR2P41597 374 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF136P52737 540 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 HTRA4P83105 476 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 MSMO1Q15800 293 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 TANGO2Q6ICL3 276 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ADAM5Q6NVV9 412 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 MRPL41Q8IXM3 137 aaKnown RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 HSD17B11Q8NBQ5 300 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 GJC3Q8NFK1 279 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 SLC25A43Q8WUT9 341 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ABHD6Q9BV23 337 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ULBP2Q9BZM5 246 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 ZMAT5Q9UDW3 170 aaKnown RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 LRP12Q9Y561 859 aa7.93□□□□□ -1.14
PCDH9-202ENST00000377865 DICER1Q9UPY3 1922 aaKnown RBP7.93□□□□□ -1.14
PCDH9-202ENST00000377865 H2AFB1P0C5Y9 115 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 TBXA2RP21731 343 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 DPP4P27487 766 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 CLDN17P56750 224 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 PPP1R1AQ13522 171 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF273Q14593 569 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.92□□□□□ -1.14
PCDH9-202ENST00000377865 DEFB119Q8N690 84 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 OR4D9Q8NGE8 314 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 OR1J1Q8NGS3 322 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 ZG16BQ96DA0 208 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 NKX3-1Q99801 234 aaPredicted RBP7.92□□□□□ -1.14
PCDH9-202ENST00000377865 TMPRSS5Q9H3S3 457 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 CHRNA9Q9UGM1 479 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 AK3Q9UIJ7 227 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 NYNRINQ9P2P1 1898 aaKnown RBP7.92□□□□□ -1.14
PCDH9-202ENST00000377865 ZNF587BE7ETH6 402 aa7.92□□□□□ -1.14
PCDH9-202ENST00000377865 FOSL2P15408 326 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms