RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GAB1Q13480 694 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 OR52N5Q8NH56 324 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 PPP1R1CQ8WVI7 109 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 PNO1Q9NRX1 252 aaKnown RBP4.46□□□□□ -1.69
PCDH9-201ENST00000377861 MAGEB1P43366 347 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 SELENOTP62341 195 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 NEK7Q8TDX7 302 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 VSTM2LQ96N03 204 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 IL21Q9HBE4 155 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 TIGITQ495A1 244 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 BRICD5Q6PL45 260 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 VSTM2AQ8TAG5 236 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 MIXL1Q9H2W2 232 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 HINT3Q9NQE9 182 aaKnown RBP4.46□□□□□ -1.69
PCDH9-201ENST00000377861 UQCC1Q9NVA1 299 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 KLRF1Q9NZS2 232 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 SH2D1BO14796 132 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 BHLHE23Q8NDY6 225 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 CLEC5AQ9NY25 188 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 TP53TG5Q9Y2B4 290 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 FAM90A9PA6NNJ1 464 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 M0R296 226 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 PTNP21246 168 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 OMGP23515 440 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 CD38P28907 300 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 SLC7A5P1Q8MH63 180 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 CCL22O00626 93 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 HTR5AP47898 357 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM241Q24JQ0 296 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 KCNK6Q9Y257 313 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 WNT6Q9Y6F9 365 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 TRBV5-7A0A0A0MS05 114 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 E9PQ18 207 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 CYR61O00622 381 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 SFTPBP07988 381 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 HOXD11P31277 338 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 NKX2-5P52952 324 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 FAM27BQ5VT28 67 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 C19orf47Q8N9M1 422 aaKnown RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 METTL1Q9UBP6 276 aaKnown RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 CCL16O15467 120 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 GPANK1O95872 356 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 C8orf89P0DMQ9 161 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 RPL29P47914 159 aaKnown RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 CCR6P51684 374 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 OR10J5Q8NHC4 309 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 SFXN3Q9BWM7 321 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 A0A1B0GW15 77 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 CEACAM5P06731 702 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 PDLIM3Q53GG5 364 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 LRTM2Q8N967 370 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 ERGIC1Q969X5 290 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 CLEC2DQ9UHP7 191 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 MRPL33O75394 65 aaKnown RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF888P0CJ79 500 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 CD82P27701 267 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 RAC1P63000 192 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF92Q03936 586 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 S100PBPQ96BU1 408 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 DMRTB1Q96MA1 342 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 CHIAQ9BZP6 476 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 ACTL6BO94805 426 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 ST8SIA2Q92186 375 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 NDUFA2O43678 99 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 Q6ZRG5 221 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 ESPNLQ6ZVH7 1005 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 RASD2Q96D21 266 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 CNRIP1Q96F85 164 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 HPNP05981 417 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 ADH4P08319 380 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 IGFBP1P08833 259 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 ABHD17BQ5VST6 288 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 OR5M8Q8NGP6 311 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 APOBEC3DQ96AK3 386 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 KIAA1456Q9P272 454 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 C9orf170A2RU37 121 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 CTSCP53634 463 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 NKAIN1Q4KMZ8 207 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 OR5A2Q8NGI9 324 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 PELI1Q96FA3 418 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 CA14Q9ULX7 337 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 RTCAO00442 366 aaKnown RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 GJA4P35212 333 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 HAAOP46952 286 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 KLF9Q13886 244 aaPredicted RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 SDHAF4Q5VUM1 108 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 RPUSD3Q6P087 351 aaKnown RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 NPEPL1Q8NDH3 523 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 OR2AE1Q8NHA4 323 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 FYTTD1Q96QD9 318 aaKnown RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 IL36GQ9NZH8 169 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 ANKUB1A6NFN9 424 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF587BE7ETH6 402 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 FGF7P21781 194 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 Q6ZS49 121 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 KANSL1Q7Z3B3 1105 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 RPS4Y1P22090 263 aaKnown RBP4.46□□□□□ -1.7
PCDH9-201ENST00000377861 CCL23P55773 120 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 NHLRC1Q6VVB1 395 aa4.46□□□□□ -1.7
PCDH9-201ENST00000377861 GALNT14Q96FL9 552 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms