RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 IGKV3D-11A0A0A0MRZ8 115 aa11.54□□□□□ -0.56
USP11-204ENST00000377107 OR5H14A6NHG9 310 aa11.54□□□□□ -0.56
USP11-204ENST00000377107 CCDC85CA6NKD9 419 aa11.54□□□□□ -0.56
USP11-204ENST00000377107 OR2AT4A6NND4 320 aa11.54□□□□□ -0.56
USP11-204ENST00000377107 SDCBPO00560 298 aaPredicted RBP11.54□□□□□ -0.56
USP11-204ENST00000377107 NUDT1P36639 197 aa11.54□□□□□ -0.56
USP11-204ENST00000377107 NPY4RP50391 375 aa11.54□□□□□ -0.56
USP11-204ENST00000377107 DAP3P51398 398 aaKnown RBP11.54□□□□□ -0.56
USP11-204ENST00000377107 MYBPHQ13203 477 aa11.54□□□□□ -0.56
USP11-204ENST00000377107 CSRP2Q16527 193 aa11.54□□□□□ -0.56
USP11-204ENST00000377107 ZNF519Q8TB69 540 aa11.54□□□□□ -0.56
USP11-204ENST00000377107 WDR77Q9BQA1 342 aaPredicted RBP11.54□□□□□ -0.56
USP11-204ENST00000377107 TRAF4Q9BUZ4 470 aaPredicted RBP11.54□□□□□ -0.56
USP11-204ENST00000377107 SLC22A11Q9NSA0 550 aa11.54□□□□□ -0.56
USP11-204ENST00000377107 EMC3Q9P0I2 261 aa11.54□□□□□ -0.56
USP11-204ENST00000377107 DXOO77932 396 aaKnown RBP11.53□□□□□ -0.56
USP11-204ENST00000377107 CPN1P15169 458 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 ZNF93P35789 620 aaPredicted RBP11.53□□□□□ -0.56
USP11-204ENST00000377107 NXPH1P58417 271 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 ATPAF1Q5TC12 328 aaPredicted RBP11.53□□□□□ -0.56
USP11-204ENST00000377107 SLC36A1Q7Z2H8 476 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 GPX8Q8TED1 209 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 PNPLA2Q96AD5 504 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 RADILQ96JH8 1075 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 MFRPQ9BY79 579 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 PBOV1Q9GZY1 135 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 CHST11Q9NPF2 352 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 PRMT8Q9NR22 394 aaPredicted RBP11.53□□□□□ -0.56
USP11-204ENST00000377107 B8ZZF3 427 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 STK17BO94768 372 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 CFIP05156 583 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 ZNF43P17038 809 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 DLSTP36957 453 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 GUSBP11Q6P575 273 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 VRK1Q99986 396 aaPredicted RBP11.53□□□□□ -0.56
USP11-204ENST00000377107 HRH3Q9Y5N1 445 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 MTCH2Q9Y6C9 303 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 MEGF11A6BM72 1044 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 FADS1O60427 444 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 NMBP08949 121 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 SRFP11831 508 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 RAB3AP20336 220 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 PPP1R1AQ13522 171 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 GLIPR1L1Q6UWM5 242 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 BATF2Q8N1L9 274 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 MARCH1Q8TCQ1 289 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 PPP1R1CQ8WVI7 109 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 LIPHQ8WWY8 451 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 CST11Q9H112 138 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 C1orf198Q9H425 327 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 SERINC1Q9NRX5 453 aa11.53□□□□□ -0.56
USP11-204ENST00000377107 GDF2Q9UK05 429 aaPredicted RBP11.53□□□□□ -0.56
USP11-204ENST00000377107 OR2M5A3KFT3 312 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 A6NIZ1 184 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 RAMP1O60894 148 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 WDPCPO95876 746 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 F10P00742 488 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 ERCC1P07992 297 aaPredicted RBP11.52□□□□□ -0.56
USP11-204ENST00000377107 PGAM2P15259 253 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 CD96P40200 585 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 ATP1B3P54709 279 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 RAP1BP61224 184 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 RAP1AP62834 184 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 OR5D14Q8NGL3 314 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 THAP6Q8TBB0 222 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 S100A13Q99584 98 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 NPTNQ9Y639 398 aa11.52□□□□□ -0.56
USP11-204ENST00000377107 KNG1P01042 644 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 CELA2AP08217 269 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 GABRA1P14867 456 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 GLB1P16278 677 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 OR3A2P47893 321 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 NKAPLQ5M9Q1 402 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 STPG2Q8N412 459 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 INO80EQ8NBZ0 244 aaPredicted RBP11.52□□□□□ -0.57
USP11-204ENST00000377107 RBM24Q9BX46 236 aaKnown RBP11.52□□□□□ -0.57
USP11-204ENST00000377107 GPR84Q9NQS5 396 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 ZNF701Q9NV72 531 aaPredicted RBP11.52□□□□□ -0.57
USP11-204ENST00000377107 AFF3P51826 1226 aaKnown RBP11.52□□□□□ -0.57
USP11-204ENST00000377107 ADAD2Q8NCV1 583 aaKnown RBP11.52□□□□□ -0.57
USP11-204ENST00000377107 OR1M1Q8NGA1 313 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 SCARB1Q8WTV0 552 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 ASB10Q8WXI3 467 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 ZNF501Q96CX3 271 aaPredicted RBP11.52□□□□□ -0.57
USP11-204ENST00000377107 MVB12AQ96EY5 273 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 ZNF285Q96NJ3 590 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 NUP50Q9UKX7 468 aa11.52□□□□□ -0.57
USP11-204ENST00000377107 SULT2B1O00204 365 aa11.51□□□□□ -0.57
USP11-204ENST00000377107 PMS2P2O95744 297 aa11.51□□□□□ -0.57
USP11-204ENST00000377107 IFI6P09912 130 aa11.51□□□□□ -0.57
USP11-204ENST00000377107 GLI4P10075 376 aa11.51□□□□□ -0.57
USP11-204ENST00000377107 CLDN17P56750 224 aa11.51□□□□□ -0.57
USP11-204ENST00000377107 COL13A1Q5TAT6 717 aaPredicted RBP11.51□□□□□ -0.57
USP11-204ENST00000377107 RAET1LQ5VY80 246 aa11.51□□□□□ -0.57
USP11-204ENST00000377107 NAA40Q86UY6 237 aa11.51□□□□□ -0.57
USP11-204ENST00000377107 TMEM185AQ8NFB2 350 aa11.51□□□□□ -0.57
USP11-204ENST00000377107 LIN37Q96GY3 246 aaPredicted RBP11.51□□□□□ -0.57
USP11-204ENST00000377107 METTL8Q9H825 291 aaKnown RBP11.51□□□□□ -0.57
USP11-204ENST00000377107 ACKR4Q9NPB9 350 aa11.51□□□□□ -0.57
USP11-204ENST00000377107 GPR160Q9UJ42 338 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms