RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 TSPAN4O14817 238 aa22.55■■□□□ 1.2
C9orf40-201ENST00000376854 PIAS2O75928 621 aa22.55■■□□□ 1.2
C9orf40-201ENST00000376854 UBBP0CG47 229 aa22.55■■□□□ 1.2
C9orf40-201ENST00000376854 RPS27AP62979 156 aaKnown RBP22.55■■□□□ 1.2
C9orf40-201ENST00000376854 UBA52P62987 128 aaKnown RBP22.55■■□□□ 1.2
C9orf40-201ENST00000376854 CXADRP78310 365 aa22.55■■□□□ 1.2
C9orf40-201ENST00000376854 SMAD4Q13485 552 aaKnown RBP22.55■■□□□ 1.2
C9orf40-201ENST00000376854 CHST4Q8NCG5 386 aa22.55■■□□□ 1.2
C9orf40-201ENST00000376854 OR52N4Q8NGI2 321 aa22.55■■□□□ 1.2
C9orf40-201ENST00000376854 PDCD10Q9BUL8 212 aa22.55■■□□□ 1.2
C9orf40-201ENST00000376854 GPN3Q9UHW5 284 aaPredicted RBP22.55■■□□□ 1.2
C9orf40-201ENST00000376854 LOC100509620A0A075B734 347 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 OR14I1A6ND48 311 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 BET1O15155 118 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 C3orf33Q6P1S2 294 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 PAQR4Q8N4S7 273 aaPredicted RBP22.54■■□□□ 1.2
C9orf40-201ENST00000376854 ST8SIA2Q92186 375 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 FAM46BQ96A09 425 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 ZNF501Q96CX3 271 aaPredicted RBP22.54■■□□□ 1.2
C9orf40-201ENST00000376854 DDIT4LQ96D03 193 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 MESP1Q9BRJ9 268 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 SLC2A8Q9NY64 477 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 ARID1BQ8NFD5 2236 aaPredicted RBP22.54■■□□□ 1.2
C9orf40-201ENST00000376854 NPIPB13A6NJU9 1138 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 NPIPB4C9JG80 1138 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 HPP00738 406 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 TTRP02766 147 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 HSD11B1P28845 292 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 UNC119Q13432 240 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 GVQW1Q8N7I0 195 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 RELL2Q8NC24 303 aaPredicted RBP22.54■■□□□ 1.2
C9orf40-201ENST00000376854 CADM4Q8NFZ8 388 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 OR10H5Q8NGA6 315 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 C11orf40Q8WZ69 217 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 SLAMF6Q96DU3 332 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 EMC6Q9BV81 110 aa22.54■■□□□ 1.2
C9orf40-201ENST00000376854 TMEM200CA6NKL6 621 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 D6RAR5 112 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 SRSF4Q08170 494 aaKnown RBP22.53■■□□□ 1.2
C9orf40-201ENST00000376854 FOXF1Q12946 379 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 KLHL24Q6TFL4 600 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 ADAT3Q96EY9 351 aaPredicted RBP22.53■■□□□ 1.2
C9orf40-201ENST00000376854 SLC25A32Q9H2D1 315 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 GPR160Q9UJ42 338 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 H3BML4 177 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 CCSO14618 274 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 SYT7O43581 403 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 BCKDHBP21953 392 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 BIDP55957 195 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 TAF13Q15543 124 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 COX15Q7KZN9 410 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 SLC25A42Q86VD7 318 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 APCDD1LQ8NCL9 501 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 ZBTB44Q8NCP5 570 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 OR1M1Q8NGA1 313 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 PBOV1Q9GZY1 135 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 PTGES2Q9H7Z7 377 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 SLC22A11Q9NSA0 550 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 COMMD9Q9P000 198 aa22.53■■□□□ 1.2
C9orf40-201ENST00000376854 FER1L5A0AVI2 2057 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 LRRC37A5PQ49AS3 106 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 OR52W1Q6IF63 320 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 C11orf87Q6NUJ2 197 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 LYG2Q86SG7 212 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 SLC22A24Q8N4F4 322 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 EIF4E3Q8N5X7 224 aaKnown RBP22.52■■□□□ 1.2
C9orf40-201ENST00000376854 STT3BQ8TCJ2 826 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 NUDCD2Q8WVJ2 157 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 ST8SIA4Q92187 359 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 SEC22AQ96IW7 307 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 MS4A7Q9GZW8 240 aaPredicted RBP22.52■■□□□ 1.2
C9orf40-201ENST00000376854 CHRDQ9H2X0 955 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 WDR87Q6ZQQ6 2873 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 SHISA8B8ZZ34 492 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 ATF4P18848 351 aaPredicted RBP22.52■■□□□ 1.2
C9orf40-201ENST00000376854 ZBTB25P24278 435 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 SLC22A6Q4U2R8 563 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 STPG2Q8N412 459 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 KCNRGQ8N5I3 272 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 TMEM185BQ9H7F4 350 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 SEMA5BQ9P283 1151 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 TNFSF18Q9UNG2 199 aa22.52■■□□□ 1.2
C9orf40-201ENST00000376854 CABIN1Q9Y6J0 2220 aa22.52■■□□□ 1.19
C9orf40-201ENST00000376854 VSTM2BA6NLU5 285 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 ZNF208O43345 1280 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 BPNT1O95861 308 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 VSIG8P0DPA2 414 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 SUMO3P55854 103 aaPredicted RBP22.51■■□□□ 1.19
C9orf40-201ENST00000376854 PPP1R1AQ13522 171 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 PXT1Q8NFP0 134 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 LHFPL5Q8TAF8 219 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 MRGPRFQ96AM1 343 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 NUDT22Q9BRQ3 303 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 CST11Q9H112 138 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 CYB5R1Q9UHQ9 305 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 KANTRA0A1W2PQU2 76 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 LIPT2A6NK58 231 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 SLC25A4P12235 298 aa22.51■■□□□ 1.19
C9orf40-201ENST00000376854 MPZP25189 248 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms