RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CGGBP1Q9UFW8 167 aaPredicted RBP8.51□□□□□ -1.05
TRIM39-202ENST00000376659 PILRBQ9UKJ0 227 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 DHDHQ9UQ10 334 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 KCNK7Q9Y2U2 307 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 FLVCR1Q9Y5Y0 555 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 MFSD2BA6NFX1 497 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 DBX1A6NMT0 343 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 CEACAM18A8MTB9 384 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 KHDRBS3O75525 346 aaKnown RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 UBCP0CG48 685 aaKnown RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 HLA-GP17693 338 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 ZMYND11Q15326 602 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 OR7A5Q15622 319 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 SLC25A25Q6KCM7 469 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 ASB13Q8WXK3 278 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 RBM14Q96PK6 669 aaKnown RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 BARX1Q9HBU1 254 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF224Q9NZL3 707 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 NUP50Q9UKX7 468 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 B3GALT5Q9Y2C3 310 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 PLEKHA6Q9Y2H5 1048 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 KCNMB2Q9Y691 235 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 NTN3O00634 580 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 AKAIN1P0CW23 69 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 FGF5P12034 268 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 POU3F2P20265 443 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 CTSSP25774 331 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF121P58317 390 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 RAP2BP61225 183 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 GLYATL3Q5SZD4 288 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 ATPAF1Q5TC12 328 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 B3GNTL1Q67FW5 361 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 TMEM65Q6PI78 240 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 CPEB2Q7Z5Q1 589 aaKnown RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 PRSS58Q8IYP2 241 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 MAML2Q8IZL2 1156 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 NKAIN3Q8N8D7 197 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 OR2AK2Q8NG84 335 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 LYZL4Q96KX0 146 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 CCDC74BQ96LY2 380 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 TAS2R8Q9NYW2 309 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 KIF25Q9UIL4 384 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 VSIG4Q9Y279 399 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 TRBV11-1A0A0K0K1C0 115 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 NOS1APO75052 506 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 SLC25A12O75746 678 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 AHSA1O95433 338 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF28P17035 718 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 HSD11B1P28845 292 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 SUCLG1P53597 346 aaKnown RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 MFSD13AQ14CX5 517 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 PHYHD1Q5SRE7 291 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 KCTD18Q6PI47 426 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-202ENST00000376659 LHFPL5Q8TAF8 219 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 EDAQ92838 391 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 OR6C1Q96RD1 312 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 DPYSL5Q9BPU6 564 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 PTGES2Q9H7Z7 377 aa8.5□□□□□ -1.05
TRIM39-202ENST00000376659 UNC13CQ8NB66 2214 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 IGHV1-45A0A0A0MS14 117 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 C19orf67A6NJJ6 358 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 SOX1O00570 391 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 CREBL2O60519 120 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 HLXQ14774 488 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 PTCRAQ6ISU1 281 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 RGS7BPQ6MZT1 257 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 STEAP1BQ6NZ63 245 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 GPAT4Q86UL3 456 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 TSEN15Q8WW01 171 aaKnown RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 ST8SIA2Q92186 375 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 TMEM54Q969K7 222 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 INTS12Q96CB8 462 aaKnown RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 DDIT4LQ96D03 193 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 SLAMF6Q96DU3 332 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 IMMP1LQ96LU5 166 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 RASL10BQ96S79 203 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 GINS4Q9BRT9 223 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 POFUT1Q9H488 388 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 WDR54Q9H977 334 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 NCOA6Q14686 2063 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 TEX51A0A1B0GUA7 166 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 AQP7P3A6NL99 342 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 KLF7O75840 302 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 VSIG8P0DPA2 414 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 OTX1P32242 354 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 POU3F1Q03052 451 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 EIF3IQ13347 325 aaKnown RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 AANATQ16613 207 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 SLC22A6Q4U2R8 563 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 SFRP5Q5T4F7 317 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 FAM69BQ5VUD6 431 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 PAPD4Q6PIY7 484 aaKnown RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 KRT77Q7Z794 578 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 FTMTQ8N4E7 242 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 OR52N4Q8NGI2 321 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 TMEM234Q8WY98 164 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 DVL3Q92997 716 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 SLC25A44Q96H78 314 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 C5orf34Q96MH7 638 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 SLC6A7Q99884 636 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms