RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 RP2O75695 350 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 ERGP11308 486 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 RAB3AP20336 220 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 IL32P24001 234 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 RFC3P40938 356 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 TNFSF9P41273 254 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 HCAR3P49019 387 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 CDKN2DP55273 166 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 CLDN8P56748 225 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 RPS23P62266 143 aaKnown RBP1.25□□□□□ -2.21
VPS13A-206ENST00000376646 ESRRGP62508 458 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 RAD51Q06609 339 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 STK11Q15831 433 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 FAM83EQ2M2I3 478 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 HIKESHIQ53FT3 197 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 BEX5Q5H9J7 111 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 PLCXD3Q63HM9 321 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 PRMT9Q6P2P2 845 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 ANGPTL8Q6UXH0 198 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 RIMKLAQ8IXN7 391 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 SAXO1Q8IYX7 474 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 ARRDC1Q8N5I2 433 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 C8orf31Q8N9H6 132 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 LRRC75AQ8NAA5 344 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 C11orf72Q8NBR9 251 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 PIFOQ8TCI5 191 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 GPX8Q8TED1 209 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 NRBF2Q96F24 287 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 JSRP1Q96MG2 331 aaPredicted RBP1.25□□□□□ -2.21
VPS13A-206ENST00000376646 RNF145Q96MT1 663 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 NDFIP1Q9BT67 221 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 UBE2ZQ9H832 354 aaPredicted RBP1.25□□□□□ -2.21
VPS13A-206ENST00000376646 CLN6Q9NWW5 311 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 PLEKHG2Q9H7P9 1386 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 MROH7Q68CQ1 1323 aa1.25□□□□□ -2.21
VPS13A-206ENST00000376646 TMEM120BA0PK00 339 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 OR6C74A6NCV1 312 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 SYCE1LA8MT33 242 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 GABRPO00591 440 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 PLPP1O14494 284 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 CDC40O60508 579 aaKnown RBP eCLIP1.24□□□□□ -2.21
VPS13A-206ENST00000376646 SCELO95171 688 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 CTDNEP1O95476 244 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 OXTP01178 125 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 POLR2MP0CAP2 368 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 IGHV1-8P0DP01 117 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 TCP1P17987 556 aaKnown RBP1.24□□□□□ -2.21
VPS13A-206ENST00000376646 RAB4AP20338 218 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 SSTR5P35346 364 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 ZNF121P58317 390 aaPredicted RBP1.24□□□□□ -2.21
VPS13A-206ENST00000376646 RAB11AP62491 216 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 SYCNQ0VAF6 134 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 ART3Q13508 389 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 DOC2AQ14183 400 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 RAB11BQ15907 218 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 GABRA6Q16445 453 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 LINC00483Q53H64 154 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 GCSAMLQ5JQS6 135 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 FAM78AQ5JUQ0 283 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 ZNF547Q8IVP9 402 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 GPR26Q8NDV2 337 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 OR11H7Q8NGC8 314 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 OR6Q1Q8NGQ2 317 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 OR51F2Q8NH61 342 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 GLYATL2Q8WU03 294 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 KIAA1143Q96AT1 154 aaPredicted RBP1.24□□□□□ -2.21
VPS13A-206ENST00000376646 APH1AQ96BI3 265 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 FOPNLQ96NB1 174 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 OPALINQ96PE5 141 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 UQCC2Q9BRT2 126 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 CLSTN2Q9H4D0 955 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 CHRAC1Q9NRG0 131 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 SLC39A1Q9NY26 324 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 YARS2Q9Y2Z4 477 aaKnown RBP1.24□□□□□ -2.21
VPS13A-206ENST00000376646 RHBDD3Q9Y3P4 386 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 SAR1BQ9Y6B6 198 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 IGLV1-50A0A075B6I6 118 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 IGKV2D-24A0A075B6R9 120 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 NMT2O60551 498 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 CTSLP07711 333 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 GABRG2P18507 467 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 USF1P22415 310 aaPredicted RBP1.24□□□□□ -2.21
VPS13A-206ENST00000376646 GPR1P46091 355 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 OR1G1P47890 313 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 BCAP31P51572 246 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 PFN3P60673 137 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 PRR3P79522 188 aaKnown RBP1.24□□□□□ -2.21
VPS13A-206ENST00000376646 NCF4Q15080 339 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 UBE2SQ16763 222 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 RPEL1Q2QD12 228 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 SMUG1Q53HV7 270 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 NANOGP8Q6NSW7 305 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 NTM-AS1Q6ZSK4 140 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 HORMAD1Q86X24 394 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 APRG1Q8IVJ8 170 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 ZNF695Q8IW36 515 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 COX18Q8N8Q8 333 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 COQ8AQ8NI60 647 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 SYNPRQ8TBG9 265 aa1.24□□□□□ -2.21
VPS13A-206ENST00000376646 C15orf40Q8WUR7 153 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms