RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 MARCH3Q86UD3 253 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 UBTD2Q8WUN7 234 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 SEH1LQ96EE3 360 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 TECTBQ96PL2 329 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 OR2A14Q96R47 310 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 GLIPR2Q9H4G4 154 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 M0R1B8 84 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 ST8SIA5O15466 376 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 SYT6Q5T7P8 510 aaPredicted RBP11.41□□□□□ -0.58
VPS13A-204ENST00000376634 PINX1Q96BK5 328 aaKnown RBP11.41□□□□□ -0.58
VPS13A-204ENST00000376634 C12orf57Q99622 126 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 HS3ST2Q9Y278 367 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 COX20Q5RI15 118 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 ADIPOR1Q96A54 375 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 PDLIM5Q96HC4 596 aaKnown RBP11.41□□□□□ -0.58
VPS13A-204ENST00000376634 CSF3RQ99062 836 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 TXLNGYQ9BZA5 131 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 GMPR2Q9P2T1 348 aaKnown RBP11.41□□□□□ -0.58
VPS13A-204ENST00000376634 NUMBLQ9Y6R0 609 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 DYSFO75923 2080 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 C6orf15Q6UXA7 325 aaPredicted RBP11.41□□□□□ -0.58
VPS13A-204ENST00000376634 CPEB2Q7Z5Q1 589 aaKnown RBP11.41□□□□□ -0.58
VPS13A-204ENST00000376634 CHAC2Q8WUX2 184 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 DRGXA6NNA5 263 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 AKR7A3O95154 331 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 TEKQ02763 1124 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 SPANXN5Q5MJ07 72 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 C17orf107Q6ZR85 190 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 TMEM38AQ9H6F2 299 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 TAS2R4Q9NYW5 299 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 NRASP01111 189 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 RBP2P50120 134 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 RPS16P62249 146 aaKnown RBP11.4□□□□□ -0.58
VPS13A-204ENST00000376634 CDH26Q8IXH8 852 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 SLC17A4Q9Y2C5 497 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 NCKAP5O14513 1909 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 ST8SIA3O43173 380 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 PDGFAP04085 211 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 EMC4Q5J8M3 183 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 SCD5Q86SK9 330 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 BATF2Q8N1L9 274 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 C11orf54Q9H0W9 315 aaPredicted RBP11.4□□□□□ -0.58
VPS13A-204ENST00000376634 RAB18Q9NP72 206 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 STRAPQ9Y3F4 350 aaKnown RBP11.4□□□□□ -0.58
VPS13A-204ENST00000376634 ACSM4P0C7M7 580 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 SHC1P29353 583 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 HAPLN2Q9GZV7 340 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 FBXO34Q9NWN3 711 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 DOCK4Q8N1I0 1966 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 ALOX12BO75342 701 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 OR2F2O95006 317 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 FGF7P21781 194 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 ZNF154Q13106 437 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 OR2F1Q13607 317 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 OR13D1Q8NGV5 346 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 GAREM1Q9H706 876 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 LYRM2Q9NU23 88 aaPredicted RBP11.4□□□□□ -0.58
VPS13A-204ENST00000376634 WNK1Q9H4A3 2382 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 SOX18P35713 384 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 ELAVL1Q15717 326 aaKnown RBP11.4□□□□□ -0.58
VPS13A-204ENST00000376634 C1orf220Q5T0J3 134 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 SLC38A9Q8NBW4 561 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 ANGPTL6Q8NI99 470 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 BLNKQ8WV28 456 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 IGHV3-9P01782 118 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 OR5H8P0DN80 308 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 ZNF628Q5EBL2 1059 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 ADAM5Q6NVV9 412 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 DHRS11Q6UWP2 260 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 C17orf78Q8N4C9 275 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 SLCO1B1Q9Y6L6 691 aa11.4□□□□□ -0.58
VPS13A-204ENST00000376634 RIF1Q5UIP0 2472 aaKnown RBP11.4□□□□□ -0.59
VPS13A-204ENST00000376634 RALGAPA2Q2PPJ7 1873 aa11.4□□□□□ -0.59
VPS13A-204ENST00000376634 CLEC9AQ6UXN8 241 aa11.4□□□□□ -0.59
VPS13A-204ENST00000376634 SLC38A6Q8IZM9 456 aa11.4□□□□□ -0.59
VPS13A-204ENST00000376634 MRPL43Q8N983 215 aaKnown RBP11.4□□□□□ -0.59
VPS13A-204ENST00000376634 OR52N1Q8NH53 320 aa11.4□□□□□ -0.59
VPS13A-204ENST00000376634 INSM2Q96T92 566 aaPredicted RBP11.4□□□□□ -0.59
VPS13A-204ENST00000376634 PLA2G12AQ9BZM1 189 aa11.4□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF749O43361 778 aa11.4□□□□□ -0.59
VPS13A-204ENST00000376634 KIAA1024LP59773 190 aa11.4□□□□□ -0.59
VPS13A-204ENST00000376634 COL13A1Q5TAT6 717 aaPredicted RBP11.4□□□□□ -0.59
VPS13A-204ENST00000376634 SLC46A2Q9BY10 475 aa11.4□□□□□ -0.59
VPS13A-204ENST00000376634 USP22Q9UPT9 525 aa11.4□□□□□ -0.59
VPS13A-204ENST00000376634 TRABD2BA6NFA1 517 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 MLF2Q15773 248 aaPredicted RBP11.39□□□□□ -0.59
VPS13A-204ENST00000376634 IQCJQ1A5X6 159 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 SLC39A7Q92504 469 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 FYTTD1Q96QD9 318 aaKnown RBP11.39□□□□□ -0.59
VPS13A-204ENST00000376634 FGF21Q9NSA1 209 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 LOC107986453A0A1B0GWG9 222 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF727A8MUV8 499 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 MPGP29372 298 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 RAB1AP62820 205 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 HSF5Q4G112 596 aaPredicted RBP11.39□□□□□ -0.59
VPS13A-204ENST00000376634 MORN1Q5T089 497 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 LSRQ86X29 649 aaPredicted RBP11.39□□□□□ -0.59
VPS13A-204ENST00000376634 SLC39A11Q8N1S5 342 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 SIRT6Q8N6T7 355 aa11.39□□□□□ -0.59
VPS13A-204ENST00000376634 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms